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Remove node_modules from cache_dirs #31

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@danhunsaker
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Even if Nanobox was actively maintained, this PR would be rejected, since node_modules is the reason cache_dirs exist in the first place. Keep in mind that the dependencies installed on the host might be different than the ones needed by Nanobox, because of differences in software and versions between the host and the Nanobox container. That's why dependencies are cached in the first place - to ensure the correct ones are available for your app when it's running within Nanobox, be that local, dry-run, or deployed.

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