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Add missing fasta's
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bartcharbon committed Jun 14, 2022
1 parent 763444e commit 5b0c6b0
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22 changes: 22 additions & 0 deletions src/mocks/GRCh37/static.ts
Original file line number Diff line number Diff line change
@@ -1,8 +1,11 @@
import bamUrl from "./alignment.bam.blob";
import decisionTreeJson from "./decisionTree.json";
import fastaUrl1_10042288_10042788 from "./fasta/1-10042288-10042788.fasta.gz.blob";
import fastaUrl1_16375333_16375833 from "./fasta/1-16375333-16375833.fasta.gz.blob";
import fastaUrl1_16376162_16376662 from "./fasta/1-16376162-16376662.fasta.gz.blob";
import fastaUrl1_17348965_17349469 from "./fasta/1-17348965-17349469.fasta.gz.blob";
import fastaUrl1_17348969_17349469 from "./fasta/1-17348969-17349469.fasta.gz.blob";
import fastaUrl1_17354844_17355344 from "./fasta/1-17354844-17355344.fasta.gz.blob";
import fastaUrl1_152520538_152521038 from "./fasta/1-152520538-152521038.fasta.gz.blob";
import fastaUrl2_47635417_47635917 from "./fasta/2-47635417-47635917.fasta.gz.blob";
import fastaUrl4_106320044_106320544 from "./fasta/4-106320044-106320544.fasta.gz.blob";
Expand All @@ -11,14 +14,22 @@ import fastaUrl7_42064707_42065207 from "./fasta/7-42064707-42065207.fasta.gz.bl
import fastaUrl8_61764893_61765393 from "./fasta/8-61764893-61765393.fasta.gz.blob";
import fastaUrl8_145140250_145140750 from "./fasta/8-145140250-145140750.fasta.gz.blob";
import fastaUrl9_107546383_107546883 from "./fasta/9-107546383-107546883.fasta.gz.blob";
import fastaUrl9_107584614_107585114 from "./fasta/9-107584614-107585114.fasta.gz.blob";
import fastaUrl10_126091249_126091749 from "./fasta/10-126091249-126091749.fasta.gz.blob";
import fastaUrl11_134013975_134014475 from "./fasta/11-134013975-134014475.fasta.gz.blob";
import fastaUrl13_77569878_77570378 from "./fasta/13-77569878-77570378.fasta.gz.blob";
import fastaUrl14_89307588_89308088 from "./fasta/14-89307588-89308088.fasta.gz.blob";
import fastaUrl14_89309945_89310445 from "./fasta/14-89309945-89310445.fasta.gz.blob";
import fastaUrl14_89336157_89336657 from "./fasta/14-89336157-89336657.fasta.gz.blob";
import fastaUrl14_105167610_105168110 from "./fasta/14-105167610-105168110.fasta.gz.blob";
import fastaUrl17_29555814_29556314 from "./fasta/17-29555814-29556314.fasta.gz.blob";
import fastaUrl17_29585172_29585672 from "./fasta/17-29585172-29585672.fasta.gz.blob";
import fastaUrl17_29663629_29664129 from "./fasta/17-29663629-29664129.fasta.gz.blob";
import fastaUrl17_29675976_29676476 from "./fasta/17-29675976-29676476.fasta.gz.blob";
import fastaUrl17_29683733_29684233 from "./fasta/17-29683733-29684233.fasta.gz.blob";
import fastaUrl19_11215896_11216396 from "./fasta/19-11215896-11216396.fasta.gz.blob";
import fastaUrl19_11223801_11224301 from "./fasta/19-11223801-11224301.fasta.gz.blob";
import fastaUrl19_17449149_17449649 from "./fasta/19-17449149-17449649.fasta.gz.blob";
import fastaUrl19_17451747_17452247 from "./fasta/19-17451747-17452247.fasta.gz.blob";
import fastaUrl20_62326742_62327242 from "./fasta/20-62326742-62327242.fasta.gz.blob";
import fastaUrl22_50627343_50627843 from "./fasta/22-50627343-50627843.fasta.gz.blob";
Expand All @@ -42,8 +53,11 @@ export const decisionTree: DecisionTree = decisionTreeJson as DecisionTree;

export const fastaGz = {
"1:10042288-10042788": await fetchAsBytes(fastaUrl1_10042288_10042788 as string),
"1:16375333-16375833": await fetchAsBytes(fastaUrl1_16375333_16375833 as string),
"1:16376162-16376662": await fetchAsBytes(fastaUrl1_16376162_16376662 as string),
"1:17348965-17349469": await fetchAsBytes(fastaUrl1_17348965_17349469 as string),
"1:17348969-17349469": await fetchAsBytes(fastaUrl1_17348969_17349469 as string),
"1:17354844-17355344": await fetchAsBytes(fastaUrl1_17354844_17355344 as string),
"1:152520538-152521038": await fetchAsBytes(fastaUrl1_152520538_152521038 as string),
"2:47635417-47635917": await fetchAsBytes(fastaUrl2_47635417_47635917 as string),
"4:106320044-106320544": await fetchAsBytes(fastaUrl4_106320044_106320544 as string),
Expand All @@ -52,14 +66,22 @@ export const fastaGz = {
"8:61764893-61765393": await fetchAsBytes(fastaUrl8_61764893_61765393 as string),
"8:145140250-145140750": await fetchAsBytes(fastaUrl8_145140250_145140750 as string),
"9:107546383-107546883": await fetchAsBytes(fastaUrl9_107546383_107546883 as string),
"9:107584614-107585114": await fetchAsBytes(fastaUrl9_107584614_107585114 as string),
"10:126091249-126091749": await fetchAsBytes(fastaUrl10_126091249_126091749 as string),
"11:134013975-134014475": await fetchAsBytes(fastaUrl11_134013975_134014475 as string),
"13:77569878-77570378": await fetchAsBytes(fastaUrl13_77569878_77570378 as string),
"14:89307588-89308088": await fetchAsBytes(fastaUrl14_89307588_89308088 as string),
"14:89309945-89310445": await fetchAsBytes(fastaUrl14_89309945_89310445 as string),
"14:89336157-89336657": await fetchAsBytes(fastaUrl14_89336157_89336657 as string),
"14:105167610-105168110": await fetchAsBytes(fastaUrl14_105167610_105168110 as string),
"17:29555814-29556314": await fetchAsBytes(fastaUrl17_29555814_29556314 as string),
"17:29585172-29585672": await fetchAsBytes(fastaUrl17_29585172_29585672 as string),
"17:29663629-29664129": await fetchAsBytes(fastaUrl17_29663629_29664129 as string),
"17:29675976-29676476": await fetchAsBytes(fastaUrl17_29675976_29676476 as string),
"17:29683733-29684233": await fetchAsBytes(fastaUrl17_29683733_29684233 as string),
"19:11215896-11216396": await fetchAsBytes(fastaUrl19_11215896_11216396 as string),
"19:11223801-11224301": await fetchAsBytes(fastaUrl19_11223801_11224301 as string),
"19:17449149-17449649": await fetchAsBytes(fastaUrl19_17449149_17449649 as string),
"19:17451747-17452247": await fetchAsBytes(fastaUrl19_17451747_17452247 as string),
"20:62326742-62327242": await fetchAsBytes(fastaUrl20_62326742_62327242 as string),
"22:50627343-50627843": await fetchAsBytes(fastaUrl22_50627343_50627843 as string),
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