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Merge pull request #32 from moka-guys/fix_conda_env
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removes all instances of this string form pythonpath
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@Graeme-Smith
Graeme-Smith authored Jun 8, 2022
2 parents 3a528cf + ec66a50 commit 8f60601
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion wscleaner/env/activate_env_vars.sh
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Expand Up @@ -5,6 +5,6 @@ export wsc_PPCACHE=$PYTHONPATH

# Remove the dxtoolkit path from the pythonpath environment variable
# Python searches this when importing modules, causing clashes with conda install
PYTHONPATH_CLEAN=$(echo $PYTHONPATH | sed s,/usr/share/dnanexus/lib/python2.7/site-packages:,,)
PYTHONPATH_CLEAN=$(echo $PYTHONPATH | sed s,/usr/share/dnanexus/lib/python2.7/site-packages:,,g)
# Set the new pythonpath
export PYTHONPATH=$PYTHONPATH_CLEAN

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