Merge pull request #1099 from mobie/ome-zarr-multi-channel

Add all available channels of OMEZarr.
mobie · Feb 10, 2024 · 541b525 · 541b525
2 parents 4afff01 + f028652
commit 541b525
Showing 1 changed file with 5 additions and 1 deletion.
diff --git a/src/main/java/org/embl/mobie/lib/hcs/HCSPattern.java b/src/main/java/org/embl/mobie/lib/hcs/HCSPattern.java
@@ -229,6 +229,7 @@ private boolean hasChannels()
 	{
 		switch ( this )
 		{
+			case OMEZarr:
 			case Operetta:
 			case MolecularDevices:
 			case IncuCyteRaw:
@@ -274,7 +275,10 @@ public String getChannelGroup()
 	public List< String > getChannels()
 	{
 		if ( hasChannels() )
-			return Collections.singletonList( matcher.group( HCSPattern.CHANNEL ) );
+			if (this == OMEZarr)
+				return channels;
+			else
+				return Collections.singletonList( matcher.group( HCSPattern.CHANNEL ) );
 		else
 			return Collections.singletonList( "1" );
 	}