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introduce easybuild recipe (#124)
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* add environment file for eb
* add easybuild recipe
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martinschorb authored Jan 16, 2024
1 parent 7fc87f9 commit c92ede3
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1 change: 1 addition & 0 deletions .gitignore
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tmp*/
*.n5
*.h5
.idea/
27 changes: 27 additions & 0 deletions easybuild/MoBIE_utils.eb
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# EasyBuild recipy for MoBIE
# Author: Martin Schorb
# EMBL

easyblock = 'Conda'
install_cmd = 'mamba'
name = 'MoBIE_utils'
version = '0.4.5'

homepage = 'https://mobie.github.io'
description = """A python library to generate projects for MoBIE.
The MoBIE Fiji viewer is a Fiji plugin allowing easy exploration of big multi-modal images
and associated tabular data."""

source_urls = ['https://raw.githubusercontent.com/mobie/mobie-utils-python/easybuild/']
sources = ['easybuild_env.yaml']

toolchain = SYSTEM

builddependencies = [('Mamba', '4.14.0-0')]


environment_file = 'easybuild_env_%(version)s.yaml'

sanity_check_commands = ['python -c "import mobie; mobie.__version__"']

moduleclass = 'vis'
16 changes: 16 additions & 0 deletions easybuild/easybuild_env.yaml
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name:
mobie
channels:
- conda-forge
dependencies:
- mobie_utils
- cluster_tools >=0.4.4
- python-elf
- python=3.10
- numba
- jsonschema
- pandas
- pip
- requests
- pybdv >=0.5
- s3fs

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