Reset default for traces to bdv.n5

mobie · Feb 14, 2024 · b4a3856 · b4a3856
1 parent a48ca43
commit b4a3856
Show file tree

Hide file tree

Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/mobie/traces.py b/mobie/traces.py
@@ -14,7 +14,7 @@
 def add_traces(input_folder, root, dataset_name, traces_name,
                reference_name, reference_scale,
                resolution, scale_factors, chunks,
-               menu_name=None, file_format="ome.zarr", view=None,
+               menu_name=None, file_format="bdv.n5", view=None,
                max_jobs=multiprocessing.cpu_count(),
                add_default_table=True,
                seg_infos={}, unit='micrometer',

diff --git a/test/test_traces.py b/test/test_traces.py
@@ -33,7 +33,7 @@ def init_dataset(self):
         scales = [[2, 2, 2]]
         mobie.add_image(data_path, data_key, self.root, self.dataset_name, raw_name,
                         resolution=(1, 1, 1), chunks=(64, 64, 64), scale_factors=scales,
-                        tmp_folder=tmp_folder)
+                        tmp_folder=tmp_folder, file_format="bdv.n5")
 
     def generate_trace(self, trace_id):
         path = os.path.join(self.trace_folder, f"trace_{trace_id}.swc")