chore: updated copyright statement

removed exemplary databases mysql and fhir
miracum · Nov 27, 2024 · 834bc83 · 834bc83
1 parent 095df26
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diff --git a/R/DQA.R b/R/DQA.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/R/calc_cat_stats.R b/R/calc_cat_stats.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/R/calc_counts.R b/R/calc_counts.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/R/calc_description.R b/R/calc_description.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/R/calc_stats.R b/R/calc_stats.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/R/categorical_analysis.R b/R/categorical_analysis.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/R/completeness.R b/R/completeness.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/R/conformance.R b/R/conformance.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/R/count_uniques.R b/R/count_uniques.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/R/create_pdf_report.R b/R/create_pdf_report.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/R/dataloading.R b/R/dataloading.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
@@ -335,7 +335,7 @@ load_database <- function(rv,
 
       msg <- paste("Getting", i, "from database", db_name)
       sql_extended <- NULL
-      
+
       ## Apply time filtering (if needed):
       if (rv$restricting_date$use_it) {
         if (Sys.getenv(paste0(toupper(db_name), "_SQLMODIFY")) == "TRUE") {

diff --git a/R/datamap.R b/R/datamap.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/R/datetime_restrictions.R b/R/datetime_restrictions.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/R/descriptive_results.R b/R/descriptive_results.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/R/difference_check.R b/R/difference_check.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/R/etl.R b/R/etl.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/R/export_results.R b/R/export_results.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/R/extensive_summary.R b/R/extensive_summary.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/R/format_value_conformance_results.R b/R/format_value_conformance_results.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/R/get_key_col.R b/R/get_key_col.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by
@@ -25,14 +25,14 @@ get_key_col <- function(rv) {
     # our table is the "variable_name" (correspondingly,
     # the variable_name is used to store the sql statements)
   } else if (rv$source$system_type %in%
-             c("postgres", "mysql", "fhir", "oracle", "trino")) {
+             c("postgres", "oracle", "trino")) {
     # Back to key: 'variable_name' was assigned here:
     key_col_name_src <- "key"
   }
   if (rv$target$system_type == "csv") {
     key_col_name_tar <- "source_table_name"
   } else if (rv$target$system_type %in%
-             c("postgres", "mysql", "fhir", "oracle", "trino")) {
+             c("postgres", "oracle", "trino")) {
     # Back to key: 'variable_name' was assigned here:
     key_col_name_tar <- "key"
   }

diff --git a/R/mdr.R b/R/mdr.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/R/plausibilities.R b/R/plausibilities.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/R/plausibility_results.R b/R/plausibility_results.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/R/reduce_cat.R b/R/reduce_cat.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/R/report.R b/R/report.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/R/simple_summary.R b/R/simple_summary.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/R/test_csv.R b/R/test_csv.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/R/time_compare.R b/R/time_compare.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/R/utils.R b/R/utils.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/tests/testthat/test-DQA.R b/tests/testthat/test-DQA.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/tests/testthat/test-MDR.R b/tests/testthat/test-MDR.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA)
 # of electronic health records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/tests/testthat/test-check_date_restriction_requirements.R b/tests/testthat/test-check_date_restriction_requirements.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/tests/testthat/test-completeness.R b/tests/testthat/test-completeness.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/tests/testthat/test-conformance.R b/tests/testthat/test-conformance.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/tests/testthat/test-dataloading.R b/tests/testthat/test-dataloading.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/tests/testthat/test-datamap.R b/tests/testthat/test-datamap.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/tests/testthat/test-datetime_restrictions.R b/tests/testthat/test-datetime_restrictions.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/tests/testthat/test-descriptive_results.R b/tests/testthat/test-descriptive_results.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/tests/testthat/test-etl_and_differences_checks.R b/tests/testthat/test-etl_and_differences_checks.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/tests/testthat/test-export.R b/tests/testthat/test-export.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/tests/testthat/test-helper_vars.R b/tests/testthat/test-helper_vars.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/tests/testthat/test-import.R b/tests/testthat/test-import.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/tests/testthat/test-lints.R b/tests/testthat/test-lints.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/tests/testthat/test-plausibilities.R b/tests/testthat/test-plausibilities.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/tests/testthat/test-readme.R b/tests/testthat/test-readme.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by

diff --git a/tests/testthat/test-reduce_cat.R b/tests/testthat/test-reduce_cat.R
@@ -1,6 +1,6 @@
 # DQAstats - Perform data quality assessment (DQA) of electronic health
 # records (EHR)
-# Copyright (C) 2019-2022 Universitätsklinikum Erlangen
+# Copyright (C) 2019-2024 Universitätsklinikum Erlangen
 #
 # This program is free software: you can redistribute it and/or modify
 # it under the terms of the GNU General Public License as published by