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allow collections list to have no ancestor ids for all collections #1

allow collections list to have no ancestor ids for all collections

allow collections list to have no ancestor ids for all collections #1

Triggered via pull request June 5, 2024 15:48
@d-calland-callan
opened #8
treeSE
Status Failure
Total duration 19m 0s
Artifacts 5

R-CMD-check.yaml

on: pull_request
Matrix: R-CMD-check
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16 errors and 48 warnings
macos-latest (release)
R CMD check found WARNINGs
macos-latest (release)
Process completed with exit code 1.
macos-latest (release)
Elements must be named
macos-latest (release)
No such keg: /opt/homebrew/Cellar/r
ubuntu-latest (oldrel-1)
R CMD check found WARNINGs
ubuntu-latest (oldrel-1)
Process completed with exit code 1.
ubuntu-latest (oldrel-1)
Elements must be named
ubuntu-latest (release)
R CMD check found WARNINGs
ubuntu-latest (release)
Process completed with exit code 1.
ubuntu-latest (release)
Elements must be named
windows-latest (release)
R CMD check found WARNINGs
windows-latest (release)
Process completed with exit code 1.
windows-latest (release)
Elements must be named
ubuntu-latest (devel)
R CMD check found WARNINGs
ubuntu-latest (devel)
Process completed with exit code 1.
ubuntu-latest (devel)
Elements must be named
macos-latest (release)
/private/var/folders/lr/439_fwvd3m76p9vy50d57kcc0000gn/T/RtmpnIFmMR/Rbuild153562954c49/veupathUtils/man/megastudyDataReal.Rd:40: unexpected TEXT ' "VBP0000844"
macos-latest (release)
/private/var/folders/lr/439_fwvd3m76p9vy50d57kcc0000gn/T/RtmpnIFmMR/Rbuild153562954c49/veupathUtils/man/megastudyDataReal.Rd:48: unexpected TEXT ' "Canyon Rim Church"
macos-latest (release)
Found the following significant warnings:
macos-latest (release)
'::' or ':::' import not declared from: ‘scales’
macos-latest (release)
naToZero:
macos-latest (release)
Foreign function calls to a different package:
macos-latest (release)
prepare_Rd: ./man/megastudyDataReal.Rd:40: unexpected TEXT ' "VBP0000844"
macos-latest (release)
Undocumented code objects:
macos-latest (release)
S4 class codoc mismatches from Rd file 'Megastudy-class.Rd':
macos-latest (release)
Undocumented arguments in Rd file 'correlation.Rd'
macos-latest (release)
pkg-config 0.29.2_3 is already installed and up-to-date. To reinstall 0.29.2_3, run: brew reinstall pkg-config
macos-latest (release)
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!
ubuntu-latest (oldrel-1)
megastudyDataReal.Rd:40: unexpected TEXT ' "VBP0000844"
ubuntu-latest (oldrel-1)
megastudyDataReal.Rd:48: unexpected TEXT ' "Canyon Rim Church"
ubuntu-latest (oldrel-1)
'::' or ':::' import not declared from: ‘scales’
ubuntu-latest (oldrel-1)
naToZero:
ubuntu-latest (oldrel-1)
Foreign function calls to a different package:
ubuntu-latest (oldrel-1)
prepare_Rd: megastudyDataReal.Rd:40: unexpected TEXT ' "VBP0000844"
ubuntu-latest (oldrel-1)
Undocumented code objects:
ubuntu-latest (oldrel-1)
S4 class codoc mismatches from documentation object 'Megastudy-class':
ubuntu-latest (oldrel-1)
Undocumented arguments in documentation object 'correlation'
ubuntu-latest (release)
/tmp/Rtmp9zgafD/Rbuild19ba60c4b5e2/veupathUtils/man/megastudyDataReal.Rd:40: unexpected TEXT ' "VBP0000844"
ubuntu-latest (release)
/tmp/Rtmp9zgafD/Rbuild19ba60c4b5e2/veupathUtils/man/megastudyDataReal.Rd:48: unexpected TEXT ' "Canyon Rim Church"
ubuntu-latest (release)
'::' or ':::' import not declared from: ‘scales’
ubuntu-latest (release)
naToZero:
ubuntu-latest (release)
Foreign function calls to a different package:
ubuntu-latest (release)
prepare_Rd: ./man/megastudyDataReal.Rd:40: unexpected TEXT ' "VBP0000844"
ubuntu-latest (release)
Undocumented code objects:
ubuntu-latest (release)
S4 class codoc mismatches from Rd file 'Megastudy-class.Rd':
ubuntu-latest (release)
Undocumented arguments in Rd file 'correlation.Rd'
windows-latest (release)
C:/Users/runneradmin/AppData/Local/Temp/Rtmp69f5Ao/Rbuild6ac7acb41c6/veupathUtils/man/megastudyDataReal.Rd:40: unexpected TEXT ' "VBP0000844"
windows-latest (release)
C:/Users/runneradmin/AppData/Local/Temp/Rtmp69f5Ao/Rbuild6ac7acb41c6/veupathUtils/man/megastudyDataReal.Rd:48: unexpected TEXT ' "Canyon Rim Church"
windows-latest (release)
'::' or ':::' import not declared from: 'scales'
windows-latest (release)
naToZero:
windows-latest (release)
Foreign function calls to a different package:
windows-latest (release)
prepare_Rd: ./man/megastudyDataReal.Rd:40: unexpected TEXT ' "VBP0000844"
windows-latest (release)
Undocumented code objects:
windows-latest (release)
S4 class codoc mismatches from Rd file 'Megastudy-class.Rd':
windows-latest (release)
Undocumented arguments in Rd file 'correlation.Rd'
ubuntu-latest (devel)
/tmp/Rtmp8FXXaN/Rbuild5a1f4c5616b6/veupathUtils/man/megastudyDataReal.Rd:40: unexpected TEXT ' "VBP0000844"
ubuntu-latest (devel)
/tmp/Rtmp8FXXaN/Rbuild5a1f4c5616b6/veupathUtils/man/megastudyDataReal.Rd:48: unexpected TEXT ' "Canyon Rim Church"
ubuntu-latest (devel)
'::' or ':::' import not declared from: ‘scales’
ubuntu-latest (devel)
naToZero:
ubuntu-latest (devel)
Foreign function calls to a different package:
ubuntu-latest (devel)
prepare_Rd: ./man/megastudyDataReal.Rd:40: unexpected TEXT ' "VBP0000844"
ubuntu-latest (devel)
Undocumented code objects:
ubuntu-latest (devel)
S4 class codoc mismatches from Rd file 'Megastudy-class.Rd':
ubuntu-latest (devel)
Undocumented arguments in Rd file 'correlation.Rd'

Artifacts

Produced during runtime
Name Size
Linux-X64-rdevel-2-results Expired
36 MB
Linux-X64-roldrel-1-4-results Expired
36 MB
Linux-X64-rrelease-3-results Expired
36 MB
Windows-X64-rrelease-1-results Expired
35 MB
macOS-ARM64-rrelease-0-results Expired
35 MB