1.6.3

Changes from Version 1.4 to 1.6.3

• Prepared the package for R 4.0.0 (stringsAsFactors).
• Removed dependencies to the orphaned bit package (will be missed!).

v1.4

Changes from Version 1.3 to 1.4.

• Updated vignette to make it compatible with new ggplot2 version. Also added some references and polished the text.

1.3

Changes from Version 1.2 to 1.3.

• Added binarize for fast binarization of matrices.
• Added calc_ed function (calculates distance between encodings).
• Added calc_si function (calculates similarity index of two encodings).
• Added list2matrix to easily convert list of sequences to biogram preferred matrix.
• Added vignette.
• Bug fixes in count_specified, degenerate and gap_ngrams.