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Closes #81: Handle exceptions when calculating missing/extra commands… #252

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Run time

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Job	Run time
test (v3.7.8)	1m 28s
lint (3.10)	9s
test (v4.0.7)	2m 1s
lint (3.11)	12s
test (v4.1.1)	2m 0s
lint (3.12)	6s
	5m 56s