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Merge pull request #18 from medizininformatik-initiative/release-v0.2.0
Release v0.2.0
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reports/*.json | ||
certs/ | ||
temp/ | ||
__pycache__/ | ||
__pycache__/ | ||
config/config.yml |
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# Changelog | ||
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## v0.1.0 | ||
All notable changes to this project will be documented in this file. | ||
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Initial Logged Version | ||
The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/), | ||
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## [UNRELEASED] - yyyy-mm-dd | ||
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### Added | ||
### Changed | ||
### Deprecated | ||
### Removed | ||
### Fixed | ||
### Security | ||
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## [0.2.0] - 2024-01-23 | ||
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### Added | ||
- Add logging ([#7](https://github.com/medizininformatik-initiative/feasibility-monitoring/issues/7)) | ||
- Generate Ping Report Summary ([#10](https://github.com/medizininformatik-initiative/feasibility-monitoring/issues/10)) | ||
- Add additional Specimen queries ([#15](https://github.com/medizininformatik-initiative/feasibility-monitoring/issues/15)) | ||
- Add additional Laboratory Values ([#17](https://github.com/medizininformatik-initiative/feasibility-monitoring/issues/17)) | ||
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### Changed | ||
- History Table - display order date columns from newest to oldest ([#11](https://github.com/medizininformatik-initiative/feasibility-monitoring/issues/11)) | ||
- Sort rows for all tables alphabetically by sitename ([#12](https://github.com/medizininformatik-initiative/feasibility-monitoring/issues/12)) | ||
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### Fixed | ||
- Set docker image to release ([#6](https://github.com/medizininformatik-initiative/feasibility-monitoring/issues/6)) | ||
- Include all sites that answer into report ([#8](https://github.com/medizininformatik-initiative/feasibility-monitoring/issues/8)) | ||
- Site Url -> Site Identifier in table ([#9](https://github.com/medizininformatik-initiative/feasibility-monitoring/issues/9)) | ||
- Adding new site breaks history table ([#13](https://github.com/medizininformatik-initiative/feasibility-monitoring/issues/13)) | ||
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## [0.1.0] - 2024-01-23 | ||
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### Added | ||
- Add `Changelog.md` | ||
- Add `Development.md` | ||
- Add `.env.default` | ||
- Add github workflow to automate the Docker image build process | ||
- Add history table to display results over time | ||
- Add shell script to execute the monitoring without docker for easier testing during development | ||
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### Changed | ||
- Update Readme | ||
- Rename and move files for better file structure | ||
- Extend feasibility test to evaluate multilpe modules | ||
- Extend feasibility table to display additional summary fields | ||
- Make Confluence page content and DSF sites configurable |
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feas-page-title: "FDPG Monitoring: Feasibility Test Modulabdeckung - Testumgebung" | ||
feas-page-content-html: | | ||
<div> | ||
<strong>Ausgewählte automatische Abfragen des FDPG Machbarkeitsportal</strong><br></br> | ||
Für Öffnung vorausgesetzt:<br></br> | ||
<strong>Patient</strong>: code=263495000 (female|male) <br></br> | ||
<strong>Condition</strong>: code=E10-E14 (Diabetes mellitus)<br></br> | ||
<strong>Labor</strong>: code=718-7|17856-6|4548-4|4549-2 (Hemoglobin)<br></br> | ||
<strong>Prozedur</strong>: code=3-20|8-19 (CT,nativ| Verbände Gewebe)<br></br> | ||
<strong>Konsent</strong>: code=central-consent (MDAT wissenschaftlich nutzen)<br></br> | ||
<br></br> | ||
<strong>Für Öffnung nicht vorausgesetzt:</strong><br></br> | ||
Medikation (admin): code=A10 (Antidiabetika)<br></br> | ||
Specimen: code=119297000|119361006|119376003|441652008|441479001|420135007<br></br> | ||
(Blood|Plasma|Tissue|fixed Tissue|fresh Tissue|Whole blood)<br></br> | ||
</div> | ||
<div> | ||
<br></br><br></br> | ||
Standorte die nicht angeschlossen sind finden die Anleitungen zum Anschluss ans Feasibility-Portal | ||
mit Aktin hier:<br></br> | ||
https://github.com/medizininformatik-initiative/feasibility-deploy/tree/v2.0.0<br></br> | ||
Für das Triangle-Update der Readme hier folgen: https://github.com/medizininformatik-initiative/feasibility-deploy/tree/v2.0.0/feasibility-triangle#updating-the-feasibility-triangle<br></br> | ||
Die neue Ontologie muss hier runtergeladen werden: https://confluence.imi.med.fau.de/display/MIIC/Ontologie<br></br> | ||
<br></br> | ||
mit DSF hier:<br></br> | ||
https://github.com/medizininformatik-initiative/feasibility-deploy/wiki/DSF-Middleware-Setup<br></br> | ||
<br></br> | ||
Informationen zum Feasibility Portal, DIZ-Dashboard und zur Datenausleitung mit DSF finden Sie hier:<br></br> | ||
https://xdash.forschen-fuer-gesundheit.de/?readme<br></br> | ||
<br></br> | ||
Kontakt: [email protected] <br></br> | ||
</div> | ||
<br></br> | ||
<div> | ||
<strong>Legende</strong>:<br></br> | ||
<strong>„YES“</strong>: mehr als 20 Datenpunkte<br></br> | ||
<strong>„no“</strong>: weniger als 20 Datenpunkte<br></br> | ||
<strong>„.“</strong>: keine Antwort<br></br> | ||
</div> | ||
hist-page-title: "FDPG Monitoring: Feasibility Test Historie - Testumgebung" | ||
hist-page-content-html: | | ||
<div> | ||
<strong>Abfrage für Test der 14 - tägigen Erreichbarkeit der Standorte für das FDPG Machbarkeitsportal:</strong><br></br> | ||
<strong>Patient</strong>: code=263495000 (female|male) <br></br> | ||
</div> | ||
ping-page-title: "FDPG Monitoring: Ping Test - Testumgebung" | ||
ping-page-content-html: | | ||
<div> | ||
<strong> DSF Ping Test. Prüft ob das DSF der Standorte über den DSF Ping-Pong Prozess erreichbar ist.</strong> | ||
</div> | ||
dsf-site-ids: | | ||
[ | ||
"ukaachen.de", "uk-augsburg.de", "charite.de", "ukbonn.de", "ukdd.de", "uniklinik-duesseldorf.de", "www.uk-erlangen.de", "uk-essen.de", "kgu.de", | ||
"uniklinik-freiburg.de", "uni-giessen.de", "umg.eu", "www.medizin.uni-greifswald.de", "uk-halle.de", "uke.de", "mh-hannover.de", "ukhd.de", | ||
"uniklinikum-jena.de", "uk-koeln.de", "uniklinikum-leipzig.de", "www.med.uni-magdeburg.de", "unimedizin-mainz.de", "umm.de", "uni-marburg.de", | ||
"lmu-klinikum.de", "mri.tum.de", "ukm.de", "ukr.de", "med.uni-rostock.de", "uks.eu", "uksh.de","medizin.uni-tuebingen.de", "uniklinik-ulm.de", "ukw.de" | ||
] |
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requests==2.22.0 | ||
psycopg2==2.9.3 | ||
prettytable==3.3.0 | ||
prettytable==3.9.0 | ||
PyYAML==6.0 |
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