conforming other scripts to bash/sql refactoring #190
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| on: | |
| push: | |
| branches: '*' | |
| pull_request: | |
| branches: '*' | |
| name: build | |
| jobs: | |
| build: | |
| runs-on: ubuntu-18.04 | |
| env: | |
| R_LIBS_USER: ${{ github.workspace }}/RLibs | |
| services: | |
| # Label used to access the service container | |
| postgres: | |
| # Docker Hub image | |
| image: postgis/postgis:11-2.5 | |
| # Provide the password for postgres | |
| env: | |
| POSTGRES_PASSWORD: postgres | |
| POSTGRES_DB: network_test | |
| # Set health checks to wait until postgres has started | |
| options: >- | |
| --health-cmd pg_isready | |
| --health-interval 10s | |
| --health-timeout 5s | |
| --health-retries 5 | |
| ports: | |
| # Maps tcp port 5432 on service container to the host | |
| - 5432:5432 | |
| steps: | |
| - name: Test postgres setup | |
| run: | | |
| psql -U postgres -c 'select version();' | |
| env: | |
| PGHOST: localhost | |
| PGPASSWORD: postgres | |
| PGPORT: 5432 | |
| - name: Install required packages | |
| run: | | |
| sudo apt update | |
| sudo apt-get install libudunits2-dev libgdal-dev gdal-bin | |
| - name: Clone matsim-melbourne/network | |
| uses: actions/checkout@v2 | |
| with: | |
| repository: matsim-melbourne/network | |
| path: network | |
| - name: Setup dirs and permissions for installing R packages | |
| run: | | |
| mkdir -p $R_LIBS_USER | |
| sudo chown -R $USER:$USER $GITHUB_WORKSPACE/network | |
| sudo chown -R $USER:$USER $R_LIBS_USER | |
| - name: Get network data | |
| if: steps.cache-packrat.outputs.cache-hit != 'true' | |
| working-directory: network/data | |
| run: git checkout prepare.sh && ./prepare.sh -test | |
| - name: Test OSM processing for network generation | |
| working-directory: network | |
| run: ./processOSM.sh ./data/melbourne.osm 28355 data/network.sqlite | |
| env: | |
| PGHOST: localhost | |
| PGPASSWORD: postgres | |
| PGPORT: 5432 | |
| - name: Test MATSim network generation | |
| working-directory: network | |
| shell: Rscript {0} | |
| run: | | |
| install.packages("renv") | |
| renv::restore() | |
| install.packages("testthat") | |
| testthat::test_dir("tests/testthat", stop_on_failure = TRUE) | |
| #source("NetworkGenerator.R") | |
| #makeNetwork("test) |