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Peatland considered during disaggregation #738

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merged 6 commits into from
Nov 13, 2024

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pvjeetze
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@pvjeetze pvjeetze commented Oct 29, 2024

🐦 Description of this PR 🐦

  • This PR makes sure that peatlands are considered during the disaggregation of land pools.
  • The PR only includes minor changes to extra/disaggregation.R
  • The main changes were made in the function luscale::interpolateAvlCroplandWeighted(), which is the main disaggregation function for MAgPIE land pools: pik-piam/luscale@51d2eba

🔧 Checklist for PR creator 🔧

  • Label pull request from the label list.

    • Low risk: Simple bugfixes (missing files, updated documentation, typos) or changes in start or output scripts
    • Medium risk: Uncritical changes in the model core (e.g. moderate modifications in non-default realizations)
    • High risk: Critical changes in model core or default settings (e.g. changing a model default or adjusting a core mechanic in the model)
  • Self-review own code

    • No hard coded numbers and cluster/country/region names.
    • The new code doesn't contain declared but unused parameters or variables.
    • magpie4 R library has been updated accordingly and backwards compatible where necessary.
    • scenario_config.csv has been updated accordingly (important if default.cfg has been updated)
  • Document changes

    • Add changes to CHANGELOG.md
    • Where relevant, put In-code documentation comments
    • Properly address updates in interfaces in the module documentations
    • run goxygen::goxygen() and verify the modified code is properly documented
  • Perform test runs

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    • High risk:
      • Run test runs via Rscript start.R --> "test runs"
      • Check logs for errors/warnings
      • Default run from the PR target branch for comparison
      • Provide relevant comparison plots (land-use, emissions, food prices, land-use intensity,...)

📉 Performance changes 📈

  • Current develop branch default : ** mins
  • This PR's default : ** mins

🚨 Checklist for reviewer 🚨

  • PR is labeled correctly
  • Code changes look reasonable
    • No hard coded numbers and cluster/country/region names.
    • No unnecessary increase in module interfaces
    • model behavior/performance is satisfactory.
  • Changes are properly documented
    • CHANGELOG is updated correctly
    • Updates in interfaces have been properly addressed in the module documentations
    • In-code documentation looks appropriate
  • content review done (at least 1)
  • RSE review done (at least 1)


out <- peat_hr / dimSums(land_hr[, getYears(peat_hr), ], dim = 3)
out[is.nan(out)] <- 0
out[is.infinite(out)] <- 0
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In which case do we get Inf here? When dimsums land_hr is 0 then peat_hr should also be zero, no?

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@flohump can maybe answer this better, since I only moved the code block further up. But I guess In some instances there might be cases where there is reported peatland, but LUH does not report land area. In R 1/0 = Inf

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Looks good. Many thanks for these improvements.

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flohump commented Nov 3, 2024

I found a bug in extra/disaggregation.R and fixed it
@pvjeetze please check
I also made a bugfix in luscale::interpolateAvlCroplandWeighted()

@pvjeetze pvjeetze merged commit d785b7f into magpiemodel:develop Nov 13, 2024
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3 participants