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Increment version to 2.5.0; update NEWS
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magnusdv committed Nov 5, 2023
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6 changes: 3 additions & 3 deletions DESCRIPTION
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Type: Package
Package: pedtools
Title: Creating and Working with Pedigrees and Marker Data
Version: 2.4.0
Version: 2.5.0
Authors@R:
person("Magnus Dehli", "Vigeland", , "[email protected]", role = c("aut", "cre"),
comment = c(ORCID = "0000-0002-9134-4962"))
Expand All @@ -12,8 +12,8 @@ Description: A comprehensive collection of tools for creating,
adding or removing individuals, breaking loops, and merging pedigrees.
An online tool for creating pedigrees interactively, based on
'pedtools', is available at <https://magnusdv.shinyapps.io/quickped>.
'pedtools' is the hub of the 'ped suite', a collection of packages for
pedigree analysis. A detailed presentation of the 'ped suite' is given
'pedtools' is the hub of the 'pedsuite', a collection of packages for
pedigree analysis. A detailed presentation of the 'pedsuite' is given
in the book 'Pedigree Analysis in R' (Vigeland, 2021,
ISBN:9780128244302).
License: GPL-3
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19 changes: 19 additions & 0 deletions NEWS.md
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# pedtools 2.5.0

## New features

* New functions `maskPed()` and `unmaskPed()` for anonymising pedigree data, and restoring them.

* New function `setAlleleLabels()` for changing the allele labels of a marker.

* The `.pedScaling()` gains arguments `autoScale` and `minsize`.

* `readPed()` gains argument `colSkip`, useful e.g., when reading .ped files with an AFF column.

* The `relabel()` function for relabelling individuals now allows the argument `new` to be a function, taking the `old` labels as input. For instance, `relabel(x, toupper)` gives upper-case labels for everyone.

## Bug fixes

* Preserve the class attribute of `MARKERS` when subsetting.


# pedtools 2.4.0

## New features
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2 changes: 2 additions & 0 deletions inst/WORDLIST
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ORCID
paramlink
ped
pedprobr
ribd
selfing
selfings
sibship
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