Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

R: updates for packages #26728

Merged
merged 28 commits into from
Nov 25, 2024
Merged

R: updates for packages #26728

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
28 commits
Select commit Hold shift + click to select a range
5feba52
R-aods3: update to 0.5
barracuda156 Nov 24, 2024
533a382
R-arkhe: update to 1.8.0
barracuda156 Nov 24, 2024
48de452
R-bayesammi: update to 0.3.0
barracuda156 Nov 24, 2024
644a612
R-brms: update to 2.22.6
barracuda156 Nov 24, 2024
82badf9
R-cards: update to 0.3.0
barracuda156 Nov 24, 2024
7f21f79
R-chisquare: update to 1.1.1
barracuda156 Nov 24, 2024
d00eaf4
R-collapse: update to 2.0.18
barracuda156 Nov 24, 2024
6cdbb11
R-dint: update to 2.1.5
barracuda156 Nov 24, 2024
0e41008
R-dm: update to 1.0.10.9900
barracuda156 Nov 24, 2024
31d6d90
R-exampletestr: update to 1.7.3
barracuda156 Nov 24, 2024
2c2356b
R-explore: update to 1.3.3
barracuda156 Nov 24, 2024
f97aad7
R-gt: update to 0.11.1; R-gtsummary: update to 2.0.3
barracuda156 Nov 24, 2024
3e52b23
R-hms: update to 1.1.3.9011
barracuda156 Nov 24, 2024
83f4e3c
R-LTFHPlus: update to 2.1.2
barracuda156 Nov 24, 2024
c091f88
R-lzstring: update to 0.1.3
barracuda156 Nov 24, 2024
4dda677
R-maditr: update to 0.8.5
barracuda156 Nov 24, 2024
d9998a7
R-mockr: update to 0.2.1.9021
barracuda156 Nov 24, 2024
fb49252
R-multilevelcoda: update to 1.3.1
barracuda156 Nov 24, 2024
db54806
R-networkDynamic: update to 0.11.5
barracuda156 Nov 24, 2024
403e0a1
R-pillar: update to 1.9.0.9028
barracuda156 Nov 24, 2024
e76a8ff
R-polylabelr: update to 0.3.0
barracuda156 Nov 24, 2024
0c63909
R-qpdf: update to 1.3.4
barracuda156 Nov 24, 2024
d999ff8
R-qs2: update to 0.1.2
barracuda156 Nov 24, 2024
8e5c5e4
R-RBesT: update to 1.7-4
barracuda156 Nov 24, 2024
ce9bff3
R-sleev: update to 1.0.5
barracuda156 Nov 24, 2024
f556bf3
R-smacof: update to 2.1-7
barracuda156 Nov 24, 2024
f1ff332
R-tibble: update to 3.2.1.9036
barracuda156 Nov 24, 2024
fbcb13a
R-WeightedCluster: update to 1.8-0
barracuda156 Nov 24, 2024
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
12 changes: 6 additions & 6 deletions R/R-LTFHPlus/Portfile
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -3,18 +3,18 @@
PortSystem 1.0
PortGroup R 1.0

R.setup cran EmilMiP LTFHPlus 2.1.1 v
revision 1
R.setup cran EmilMiP LTFHPlus 2.1.2 v
revision 0
categories-append math
maintainers {@barracuda156 gmail.com:vital.had} openmaintainer
maintainers nomaintainer
license GPL-3
description Implementation of LT-FH++
long_description {*}${description}, an extension of the liability-threshold \
family history (LT-FH) model.
homepage https://emilmip.github.io/LTFHPlus
checksums rmd160 f37456a38e7dc3296485b7a60ae538ceb82c7dbc \
sha256 cee9085606b5fb7094ba5bd246023bceb584a6ebd1c4168d60a464610de71d39 \
size 69880
checksums rmd160 0fba8b696e2e8aae20c9da5338974cfc5e8083ed \
sha256 238c3b38dc80814948a04b0d5fe2914b1b1bfbcd752a41864807a93fd91d3ae4 \
size 78925

depends_lib-append port:R-batchmeans \
port:R-dplyr \
Expand Down
10 changes: 5 additions & 5 deletions R/R-RBesT/Portfile
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -4,17 +4,17 @@ PortSystem 1.0
PortGroup R 1.0

# Revert to GitHub once updated there.
R.setup cran Novartis RBesT 1.7-3
revision 2
R.setup cran Novartis RBesT 1.7-4
revision 0
categories-append math
maintainers {@barracuda156 gmail.com:vital.had} openmaintainer
license GPL-3+
description R Bayesian Evidence Synthesis Tools
long_description {*}${description}
homepage https://opensource.nibr.com/RBesT
checksums rmd160 25df9ddf93f5fc9356362e68f8f7da12b8e3222d \
sha256 8a6e1a2afb07cd04f9a9bd1a1de7587c61683dd0d437db816055e30164b070a5 \
size 758806
checksums rmd160 0e00453536747a5eef85edb7f888015f6e1c6ad5 \
sha256 a3bbac106ccab50bd17823a025f62847475051e7617f9743d95c3a11ce7428fe \
size 760330

depends_lib-append port:R-abind \
port:R-assertthat \
Expand Down
14 changes: 8 additions & 6 deletions R/R-WeightedCluster/Portfile
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -3,24 +3,26 @@
PortSystem 1.0
PortGroup R 1.0

R.setup cran matthias.studer WeightedCluster 1.6-4
R.setup cran matthias.studer WeightedCluster 1.8-0
revision 0
categories-append math
maintainers {@barracuda156 gmail.com:vital.had} openmaintainer
maintainers nomaintainer
license GPL-2+
description Clustering of weighted data
long_description {*}${description}
homepage http://mephisto.unige.ch/weightedcluster
checksums rmd160 396c2562c4f238c10bdc20674eb4d7adc001b920 \
sha256 8401e1f2d956111da029b0dbd01a74559d9f4d5c757bebaefaf91d2f3928d1ab \
size 2031292
checksums rmd160 19e5ad9821e0bbeba3c0b73e3f3c9ca21d4b4ae7 \
sha256 a046c857f8bc5d8bf25d83feb18004f23b34121080692e328354779172f9eae9 \
size 2023902

depends_lib-append port:R-doFuture \
port:R-fastcluster \
port:R-foreach \
port:R-future \
port:R-progressr \
port:R-RColorBrewer \
port:R-TraMineR
port:R-TraMineR \
port:R-vegclust

depends_test-append port:R-isotone \
port:R-knitr \
Expand Down
14 changes: 7 additions & 7 deletions R/R-aods3/Portfile
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -3,17 +3,17 @@
PortSystem 1.0
PortGroup R 1.0

R.setup cran cran aods3 0.4-1.2
revision 2
R.setup cran aurelie.siberchicot aods3 0.5
revision 0
platforms {darwin any}
maintainers nomaintainer
license {GPL-2 GPL-3}
license GPL-2+
description Analysis of overdispersed data using S3 methods
long_description {*}${description}
checksums rmd160 1c5921ecf427a7738587f2a1fc5d9401036ee860 \
sha256 8d5cfcea7c971ad5ebc9e87c4b7316dbc797ce86285f02514d84296e4feea465 \
size 38756
checksums rmd160 6281e2ffa65b46e6cb3ff048289756d03baa75db \
sha256 322725869057a617e105d55d1c6e12c5c195577f0ea1daf25076568ccdb0f66e \
size 38835
supported_archs noarch
platforms {darwin any}

depends_test-append port:R-lme4

Expand Down
8 changes: 4 additions & 4 deletions R/R-arkhe/Portfile
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -3,17 +3,17 @@
PortSystem 1.0
PortGroup R 1.0

R.setup github tesselle arkhe 1.7.0 v
R.setup github tesselle arkhe 1.8.0 v
revision 0
platforms {darwin any}
maintainers nomaintainer
license GPL-3+
description Tools for cleaning rectangular data
long_description {*}${description}
homepage https://packages.tesselle.org/arkhe
checksums rmd160 32a99fb53cad1d8552372cb8a04b5823f0404c7d \
sha256 fa58338759269a7d76767094283d8102f2bbf6a8ad52fa317b16b431dd6ce24f \
size 147943
checksums rmd160 8fd523258893f21f022bca4e00bc6a9fcb98a3d8 \
sha256 1c1e731c29193eb441ecbb4609746a466d1498ed9213ad07bb067f408ff9341b \
size 154398
github.tarball_from archive
supported_archs noarch

Expand Down
20 changes: 12 additions & 8 deletions R/R-bayesammi/Portfile
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -3,24 +3,28 @@
PortSystem 1.0
PortGroup R 1.0

R.setup cran cran bayesammi 0.1.0
revision 2
R.setup cran myaseen208 bayesammi 0.3.0
revision 0
categories-append math
maintainers {@barracuda156 gmail.com:vital.had} openmaintainer
platforms {darwin any}
maintainers nomaintainer
license GPL-2
description Bayesian estimation of the Additive Main effects and Multiplicative Interaction model
description Bayesian estimation of the Additive Main effects \
and Multiplicative Interaction model
long_description {*}${description}
checksums rmd160 08d28275a1259690d5a9d1d1321da9199e825ac1 \
sha256 da9d0919d8255ce410d873da79f58c772441cefafdde21a72a2c9c7ec8accced \
size 13862
checksums rmd160 ecef9e07ec8cb95b96bc1459446a156e9b51aae9 \
sha256 9e5d3907ef6f18bfc4e3b3f8086be07c1039d5c33671633e9e791059fd670b10 \
size 20426
supported_archs noarch
platforms {darwin any}

depends_lib-append port:R-dplyr \
port:R-ggplot2 \
port:R-ggrepel \
port:R-ks \
port:R-lme4 \
port:R-magrittr \
port:R-mvtnorm \
port:R-purrr \
port:R-rlang \
port:R-rstiefel \
port:R-scales \
Expand Down
10 changes: 5 additions & 5 deletions R/R-brms/Portfile
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -3,8 +3,8 @@
PortSystem 1.0
PortGroup R 1.0

R.setup github paul-buerkner brms edecd11fa282b47edb6e96d27f8892b12d6add9c
version 2.22.3
R.setup github paul-buerkner brms 2b0bab2cffd28627a48b4a06426e90a7936572fc
version 2.22.6
revision 0
categories-append math economics
platforms {darwin any}
Expand All @@ -13,9 +13,9 @@ license GPL-2
description Bayesian applied regression modelling via RStan
long_description {*}${description}
homepage https://paul-buerkner.github.io/brms
checksums rmd160 3412e4a8736afa3c291ab0e20e4c75dc2b276a4a \
sha256 d3b5ac6bd35ec07a5989dcb075dc74d9f5c08ddd14291b2e5ab4ee59ffc4a320 \
size 5523366
checksums rmd160 4b03132dcbd8853e5845a51bb885359eb9ad89ab \
sha256 35308bfb21b77f73c9170825b6ec580ba54dbdf08ab4057b33169e7c2783da8a \
size 5527180
github.tarball_from archive
supported_archs noarch

Expand Down
8 changes: 4 additions & 4 deletions R/R-cards/Portfile
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -3,17 +3,17 @@
PortSystem 1.0
PortGroup R 1.0

R.setup github insightsengineering cards 0.2.2 v
R.setup github insightsengineering cards 0.3.0 v
revision 0
platforms {darwin any}
maintainers nomaintainer
license Apache-2
description Analysis Results Data
long_description {*}${description}
homepage https://insightsengineering.github.io/cards
checksums rmd160 c2aed2dc7de30888f783d856c829db18b5da3c71 \
sha256 8ecaae88ddfc6a3413796714b1a54bf6cab638e6345ae0d27bbff21064118c87 \
size 5563820
checksums rmd160 f1579e6a73c1bee285eecf0ff430ed1c6412260c \
sha256 41513f3dc21a062402b35d52af1a7905c61d1a160a7e3e4cbd189e9ff962d632 \
size 3700925
github.tarball_from archive
supported_archs noarch

Expand Down
8 changes: 4 additions & 4 deletions R/R-chisquare/Portfile
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -3,7 +3,7 @@
PortSystem 1.0
PortGroup R 1.0

R.setup cran gianmarcoalberti chisquare 1.0
R.setup cran gianmarcoalberti chisquare 1.1.1
revision 0
categories-append math
platforms {darwin any}
Expand All @@ -12,9 +12,9 @@ license GPL-2+
description Chi-Square and g-square test of independence, residual analysis \
and measures of categorical association
long_description {*}${description}
checksums rmd160 6915a6aff591f735fe6e6af759f72260218c3edc \
sha256 4c692d1e51937bd19029b13cff5288d05f5f1405b025afba21355d204ad450ee \
size 52695
checksums rmd160 fc6bed04fbc0d149887fb5afc3ac524000413586 \
sha256 c3d3f62d094c574c9810c5563ab66283dbde4fd3d5a6e2172f9c8673438dd303 \
size 53133
supported_archs noarch

depends_lib-append port:R-gt
Expand Down
10 changes: 6 additions & 4 deletions R/R-collapse/Portfile
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -3,16 +3,17 @@
PortSystem 1.0
PortGroup R 1.0

R.setup github SebKrantz collapse 2.0.17 v
R.setup github SebKrantz collapse 2.0.18 v
revision 0
categories-append economics math
maintainers {@barracuda156 gmail.com:vital.had} openmaintainer
license GPL-2+
description Advanced and fast data transformation
long_description {*}${description}
checksums rmd160 672ee8bc5e637ca94c3283194eee00f7cce89c85 \
sha256 6225b30fa5f3d08a80a178b4e9e84cfa8a9f5cd8cfb47deed6e3dd9dd25834e0 \
size 12015364
homepage https://sebkrantz.github.io/collapse
checksums rmd160 c05da723b185b4bcb4a5e677d7a220271a719255 \
sha256 30f8f9946cadc273ab145c1cb2dd530ae521e079e1c65a1b157c090e93b9cc40 \
size 12015989
github.tarball_from archive

depends_lib-append port:R-Rcpp
Expand All @@ -35,6 +36,7 @@ depends_test-append port:R-covr \
port:R-testthat \
port:R-tibble \
port:R-vars \
port:R-withr \
port:R-xts \
port:R-zoo

Expand Down
15 changes: 8 additions & 7 deletions R/R-dint/Portfile
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -4,17 +4,18 @@ PortSystem 1.0
PortGroup R 1.0

# GitHub version lags behind.
R.setup cran s-fleck dint 2.1.4
revision 2
maintainers {@barracuda156 gmail.com:vital.had} openmaintainer
R.setup cran s-fleck dint 2.1.5
revision 0
platforms {darwin any}
maintainers nomaintainer
license MIT
description Toolkit for year-quarter, year-month and year-isoweek dates
long_description {*}${description}
checksums rmd160 8f371ba22d6a3d815ff04814d3673f4d477e12af \
sha256 6a9612453acab03fd2de817e6030ccd92bf3289802ae7430ab58b6a888db6bc2 \
size 84431
homepage https://github.com/s-fleck/dint
checksums rmd160 b3eb889afaf1f715ae86a9f4e9312154026a60d2 \
sha256 d021cdb333707b4407b8f9345b49a0dce1815bfad026d8a5ed444cd3e3efdb61 \
size 485623
supported_archs noarch
platforms {darwin any}

depends_test-append port:R-covr \
port:R-ggplot2 \
Expand Down
10 changes: 5 additions & 5 deletions R/R-dm/Portfile
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -3,17 +3,17 @@
PortSystem 1.0
PortGroup R 1.0

R.setup github cynkra dm 1.0.10.9011 v
R.setup github cynkra dm 1.0.10.9900 v
revision 0
platforms {darwin any}
maintainers {@barracuda156 gmail.com:vital.had} openmaintainer
maintainers nomaintainer
license MIT
description Relational Data Models
long_description {*}${description}
homepage https://dm.cynkra.com
checksums rmd160 fe3a2ebbf41cfb07756973e7da1e192a7d3cdb47 \
sha256 f5349854c32b5d8b2b590bef6b4dd9e48596110f1651132240370a772718de48 \
size 3753672
checksums rmd160 40f987af832e63d110f1afc435ea44a5970b196b \
sha256 0cbe31926ce52e35e431841ced12b5619790b0938695df5b5deb560906ffd92c \
size 3755950
github.tarball_from archive
supported_archs noarch

Expand Down
8 changes: 4 additions & 4 deletions R/R-exampletestr/Portfile
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -4,7 +4,7 @@ PortSystem 1.0
PortGroup R 1.0

# GitHub version lags behind.
R.setup cran rorynolan exampletestr 1.7.2
R.setup cran rorynolan exampletestr 1.7.3
revision 0
categories-append devel
platforms {darwin any}
Expand All @@ -13,9 +13,9 @@ license GPL-3
description Help for writing unit tests based on function examples
long_description {*}${description}
homepage https://rorynolan.github.io/exampletestr
checksums rmd160 a7f014555065d9e103309af5f22c8a4a976fa3bd \
sha256 c1f4745b6ac9c93c7e55f9c9ee51913887a70d9932217ec3261bbc1553dffada \
size 50095
checksums rmd160 e2d6ab0925041f4647911f5a2e11ad0b3a304d6e \
sha256 adae9ae0f602363ad46b68296b39a66f5570860524f82e776bd6e25e92e61bff \
size 48617
supported_archs noarch

depends_lib-append port:R-checkmate \
Expand Down
8 changes: 4 additions & 4 deletions R/R-explore/Portfile
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -3,17 +3,17 @@
PortSystem 1.0
PortGroup R 1.0

R.setup cran rolkra explore 1.3.2
R.setup cran rolkra explore 1.3.3
revision 0
platforms {darwin any}
maintainers nomaintainer
license MIT
description Exploratory data analysis simplified
long_description {*}${description}
homepage https://rolkra.github.io/explore
checksums rmd160 32c20726351c5f88bddcda95c3e95da912473c24 \
sha256 d1daba49bc34a859971ff4485394aff8a9185288dce23a1baddfbd1471da9a2e \
size 2705472
checksums rmd160 94e9b059f933022736edee5629e7536c7871b374 \
sha256 ff14c1452ce83deee75983f8b35c8050b13e4837b01e1899459926b16d410fdd \
size 2717849
supported_archs noarch

depends_lib-append port:R-cli \
Expand Down
14 changes: 7 additions & 7 deletions R/R-gt/Portfile
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -3,18 +3,19 @@
PortSystem 1.0
PortGroup R 1.0

R.setup github rstudio gt 0.11.0 v
R.setup github rstudio gt 0.11.1 v
revision 0
categories-append office
platforms {darwin any}
maintainers nomaintainer
license MIT
description Build display tables from tabular data with an easy-to-use set of functions
description Build display tables from tabular data \
with an easy-to-use set of functions
long_description {*}${description}
homepage https://gt.rstudio.com
checksums rmd160 6b4d463b41f3ae5f8379d66f02988a57d5623e41 \
sha256 4af775f5628219c500f5b4865978ce344084ef84844063d74d23c0674bdde463 \
size 136452969
checksums rmd160 4ee93bed97e9aff00ee53865f89864b5f2b1e11e \
sha256 78855b2cd56c625d745586826335f0daf7bdf2673ff71bdf539457176b97af43 \
size 136657327
github.tarball_from archive
supported_archs noarch

Expand All @@ -34,13 +35,12 @@ depends_lib-append port:R-base64enc \
port:R-rlang \
port:R-sass \
port:R-scales \
port:R-tibble \
port:R-tidyselect \
port:R-vctrs \
port:R-xml2

# FIXME: https://github.com/rstudio/gt/issues/1284
patchfiles patch-no-juicyjuice-webshot2.diff
patchfiles patch-no-juicyjuice-etc.diff

# Some optional deps are omitted.
depends_test-append port:R-covr \
Expand Down
Loading
Loading