v1.0.1

What's Changed

• Material for M2LINES team meeting on 2021-04-30 by @lesommer in #1
• DA demo merge by @feiyulu in #2
• Save output data and figs, add documentation by @MitchBushuk in #3
• small fixes for demo by @feiyulu in #4
• Add DA Demo slides by @MitchBushuk in #5
• Add pytorch tutorial by @yaniyuval in #6
• reproducible code, adding figures by @yaniyuval in #7
• corrected requirements file by @yaniyuval in #8
• Notebooks for learning DA increments by @adcroft in #9
• Fix some typos in the text by Cheng. by @chzhangudel in #14
• review changes of DA notebook by @William-gregory in #13
• Review for 02type-of-parametrization by @bhouri0412 in #20
• Create jupyter book by @rabernat in #25
• Review 06-Different-ML-models by @Sshamekh in #16
• Set up pre commit by @rabernat in #27
• Add build workflow by @rabernat in #28
• Fix typo in L96 eqn for Y variable by @adconnolly in #30
• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #34
• Consolidate version of L96 module by @adcroft in #32
• Automated building by @rabernat in #33
• Standardize kernels by @rabernat in #35
• Strip notebook output by @rabernat in #37
• Fix random forest by @rabernat in #44
• Dollarmath by @breichl in #48
• Change cache behavior by @rabernat in #49
• L96 description and implementation by @bhouri0412 in #31
• Refactor environment creation and caching by @rabernat in #53
• Changes the timeout from 30 secs to 2 mins by @adcroft in #51
• Removes an unused file, LRP_gradient.py by @adcroft in #52
• Removed use of torch_lr_finder from notebooks by @adcroft in #55
• Updated Review for 04Subgrid-parametrization-pytorch by @rabernat in #54
• bibliography structure added - no citation updated in notebooks by @lzampier in #58
• Fix covariance file depend by @adcroft in #57
• Fixes a bad merge in earlier PR by @adcroft in #60
• remove notebooks/gcm-analog-demo.ipynb - content was redundant, chang… by @yaniyuval in #61
• Nn advect refinement by @breichl in #62
• gcm-parameterization-problem checked by @lzampier in #63
• Fixing header levels and bulleting in Neural_network_for_Lorenz96.ipynb by @breichl in #65
• Nn advect markdown by @breichl in #67
• Laure's notebooks by @lzampier in #68
• Merged two DA notebooks to remove need for artifact by @adcroft in #69
• Shows logs, if any by @adcroft in #70
• Removes a notebook used only to generate a figure by @adcroft in #71
• Renamed stored network by @adcroft in #73
• Big reorganization and renaming by @rabernat in #74
• Refactor interpretability notebook, add comments, and add pure Jacobian formulation by @asross in #21
• Added more explanatory cells to L96 two time-scale description by @adcroft in #75
• Remove slide-cells from presentation by @adcroft in #76
• Fixed build errors due to updated dependencies by @shan18 in #79
• fixes #80 by @IamShubhamGupto in #81
• Updating the Two-Timescale System Notebook by @shan18 in #82
• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #78
• Rearrange chapters and update table of contents by @dhruvbalwada in #90
• Gcm parameterization notebook update by @shan18 in #84
• Beautify gcm analogue by @IamShubhamGupto in #83
• Beautify Tuning GCM parameterization by @IamShubhamGupto in #85
• Beautify Neural Networks by @IamShubhamGupto in #88
• Update code and documentation of the data assimilation in L96 notebook by @shan18 in #86
• Beautify random forest parameterization by @IamShubhamGupto in #87
• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #92
• Reformat code and text in the Using neural networks for L96 parameterization notebook by @shan18 in #93
• Beautify saliency maps by @IamShubhamGupto in #94
• removed build warnings by @IamShubhamGupto in #95
• Update lock file by @shan18 in #96
• Add references by @IamShubhamGupto in #97
• Update references by @IamShubhamGupto in #99
• feature importance notebook by @IamShubhamGupto in #102
• Update the learning da increments by @shan18 in #100
• Intro to Deep Learning by @IamShubhamGupto in #105
• Splitting the Neural Networks notebook and Adding MyST visual elements to the notebooks by @shan18 in #108
• Feature importance by @IamShubhamGupto in #107
• Try Shumbham's pr-preview PR with different account by @dhruvbalwada in #110
• New/sindy eq discovery by @IamShubhamGupto in #111
• Add Equation discovery Introduction Notebook by @shan18 in #112
• Update README and fix output streams to merge into one block by @shan18 in #113
• updated the first few notebooks on gcm analogues and parameterization. by @dhruvbalwada in #114
• Possible title fix by @IamShubhamGupto in #115
• Possible fix for title v2 by @IamShubhamGupto in #117
• Add Constraints notebook by @IamShubhamGupto in #118
• GP notebook import by @IamShubhamGupto in #121
• Fix climatology figure by @NoraLoose in #122
• Fix numba warnings by @IamShubhamGupto in #124
• Introduction of distribution-based error metric by @NoraLoose in #126
• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #127
• ignore old notebooks by @IamShubhamGupto in #129
• Reworked some of the neural network notebooks by @dhruvbalwada in #128
• Update _toc.yml by @dhruvbalwada in #132
• Retry PR by @feiyulu in #131
• Added notebook for online training by @dhruvbalwada in #133
• Major restructure by @dhruvbalwada in #134
• imported cnn and resnet by @IamShubhamGupto in #136
• minor text formatting on resnet notebook by @IamShubhamGupto in #137
• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #139
• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #140
• Updated paper bib and constraints by @dhruvbalwada in #141
• Refresh cache by @IamShubhamGupto in #142
• Force rebuild all notebooks by @IamShubhamGupto in #143
• add closing references by @IamShubhamGupto in #144
• added citations to closing page by @dhruvbalwada in #145
• closing remarks force rebuild page by @IamShubhamGupto in #146
• citation by @dhruvbalwada in #148
• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #147
• Adjust environment yaml for windows by @IamShubhamGupto in #152
• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #149
• fix GP deprecation with tf-keras by @IamShubhamGupto in #153
• Update README.md by @dhruvbalwada in #156
• Update README.md by @dhruvbalwada in #154

New Contributors

• @lesommer made their first contribution in #1
• @feiyulu made their first contribution in #2
• @MitchBushuk made their first contribution in #3
• @yaniyuval made their first contribution in #6
• @adcroft made their first contribution in #9
• @chzhangudel made their first contribution in #14
• @William-gregory made their first contribution in #13
• @bhouri0412 made their first contribution in #20
• @rabernat made their first contribution in #25
• @Sshamekh made their first contribution in #16
• @adconnolly made their first contribution in #30
• @pre-commit-ci made their first contribution in #34
• @breichl made their first contribution in #48
• @lzampier made their first contribution in #58
• @asross made their first contribution in #21
• @shan18 made their first contribution in #79
• @IamShubhamGupto made their first contribution in #81
• @dhruvbalwada made their first contribution in #90
• @NoraLoose made their first contribution in #122

Full Changelog: https://github.com/m2lines/L96_demo/commits/v1.0.1