build #228
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| name: build | |
| on: | |
| push: | |
| pull_request: | |
| schedule: | |
| - cron: '0 20 * * 2' | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: [3.8,3.9,"3.10","3.11","3.12","3.13"] | |
| env: | |
| PYTHON_COVREPORTS_VERSION: 3.13 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install the GSL | |
| run: sudo apt-get install libgsl-dev | |
| - name: Install lcov | |
| run: | | |
| wget http://downloads.sourceforge.net/ltp/lcov-1.14.tar.gz | |
| tar xf lcov-1.14.tar.gz | |
| sudo make -C lcov-1.14/ install | |
| - name: Install Python dependencies | |
| run: pip install --upgrade --upgrade-strategy eager numpy scipy matplotlib setuptools | |
| - name: Install package | |
| run: | | |
| make COVERAGE=1 | |
| sudo make install | |
| make pywrapper | |
| echo "PYTHONPATH=$(echo $PYTHONPATH:$PWD/py)" >> $GITHUB_ENV | |
| - name: Test with pytest | |
| working-directory: tests | |
| run: | | |
| pip install pytest pytest-cov | |
| pytest -v test_oned.py test_twod.py test_fix.py test_log.py --cov=extreme_deconvolution --cov-config ../.coveragerc_travis --cov-report=term --cov-report=xml | |
| - name: Generate code coverage | |
| if: ${{ matrix.python-version == env.PYTHON_COVREPORTS_VERSION }} | |
| run: | | |
| lcov --capture --base-directory . --directory /home/runner/work/extreme-deconvolution/extreme-deconvolution/src/ --no-external --output-file tests/coverage.info | |
| - name: Upload coverage reports to codecov | |
| if: ${{ matrix.python-version == env.PYTHON_COVREPORTS_VERSION }} | |
| uses: codecov/codecov-action@v5 | |
| with: | |
| directory: tests | |
| token: ${{ secrets.CODECOV_TOKEN }} |