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kkrismer committed Nov 13, 2021
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# spatzie: Identification of enriched motif pairs from chromatin interaction data

[![license: GPL-3](https://img.shields.io/badge/license-GPL--3-blue)](https://opensource.org/licenses/GPL-3.0) [![DOI](https://img.shields.io/badge/DOI-10.1101%2F2021.05.25.445606-blue.svg)](https://doi.org/10.1101/2021.05.25.445606) [![BioC](https://img.shields.io/badge/BioC-0.99.14-brightgreen.svg)](https://doi.org/doi:10.18129/B9.bioc.spatzie) [![platforms](https://www.bioconductor.org/shields/availability/devel/spatzie.svg)](https://www.bioconductor.org/packages/devel/bioc/html/spatzie.html#archives) [![Coverage Status](https://coveralls.io/repos/github/jhammelman/spatzie/badge.svg?branch=master)](https://coveralls.io/github/jhammelman/spatzie?branch=master)
[![license: GPL-3](https://img.shields.io/badge/license-GPL--3-blue)](https://opensource.org/licenses/GPL-3.0) [![DOI](https://img.shields.io/badge/DOI-10.1101%2F2021.05.25.445606-blue.svg)](https://doi.org/10.1101/2021.05.25.445606) [![BioC](https://img.shields.io/badge/BioC-1.0.0-brightgreen.svg)](https://doi.org/doi:10.18129/B9.bioc.spatzie) [![platforms](https://www.bioconductor.org/shields/availability/devel/spatzie.svg)](https://www.bioconductor.org/packages/devel/bioc/html/spatzie.html#archives) [![Coverage Status](https://coveralls.io/repos/github/jhammelman/spatzie/badge.svg?branch=master)](https://coveralls.io/github/jhammelman/spatzie?branch=master)

https://spatzie.mit.edu

Expand All @@ -15,9 +15,6 @@ if (!requireNamespace("BiocManager", quietly = TRUE)) {
install.packages("BiocManager")
}
# currently spatzie is only part of the Bioconductor development branch
BiocManager::install(version = "devel")
BiocManager::install("spatzie")
```

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| Platform | Status |
|------|------|
| Travis CI | [![Travis build status](https://travis-ci.com/jhammelman/spatzie.svg?branch=master)](https://travis-ci.com/jhammelman/spatzie) |
| Bioconductor 3.14 (devel) | [![BioC devel](https://bioconductor.org/shields/build/devel/bioc/spatzie.svg)](http://bioconductor.org/checkResults/devel/bioc-LATEST/spatzie/) |
| Bioconductor 3.14 (release) | [![BioC release](https://bioconductor.org/shields/build/release/bioc/spatzie.svg)](http://bioconductor.org/checkResults/release/bioc-LATEST/spatzie/) |
| Bioconductor 3.15 (devel) | [![BioC devel](https://bioconductor.org/shields/build/devel/bioc/spatzie.svg)](http://bioconductor.org/checkResults/devel/bioc-LATEST/spatzie/) |


## Citation

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