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A python package to facilitate the development, parallel simulation, optimization and analysis of multiscale biological neuronal networks in NEURON.

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NetPyNE (Python package)

Description

NetPyNE is a Python package to facilitate the development, simulation, parallelization, analysis, and optimization of biological neuronal networks using the NEURON simulator.

For more details, installation instructions, documentation, tutorials, forums, videos and more, please visit: www.netpyne.org

This package is developed and maintained by Dura-Bernal lab (http://dura-bernal.org) and the Neurosim lab (www.neurosimlab.org).

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Acknowledgements

This work was funded by grants from the NIH, NSF, NYS SCIRB, UK Welcome Trust and Australian Research Council. We are thankful to all the contributors that have collaborated in the development of this open source tool via GitHub.

This project was supported by:

  • HBP Brain Simulation Platform funded from the European Union’s Horizon 2020 Framework Programme for Research and Innovation under the Specific Grant Agreement No. 785907 (Human Brain Project SGA2).
  • EBRAINS research infrastructure, funded from the European Union’s Horizon 2020 Framework Programme for Research and Innovation under the Specific Grant Agreement No. 945539 (Human Brain Project SGA3).

This project has received a Voucher "Integration of NetPyNE into EBRAINS Platform (EBRnetpyne)" from the European Union’s Horizon 2020 Framework Programme for Research and Innovation under the Specific Grant Agreement:

  • No. 785907 (Human Brain Project SGA2).
  • No. 945539 (Human Brain Project SGA3).

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A python package to facilitate the development, parallel simulation, optimization and analysis of multiscale biological neuronal networks in NEURON.

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  • Python 85.7%
  • Jupyter Notebook 7.0%
  • NMODL 6.9%
  • C 0.2%
  • C++ 0.1%
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