0.3.6 - small update

Small updates and bug fixes

pip install mykrobe==0.3.6

v0.3.3

New release uses mccortex as underlying engine with a python API to run predict.

New command genotype allows typing on a custom gene panel or variant panel.

This release does not include windows and mac apps (only command line version).

Initial public release of Mykrobe predictor

1. 64-bit Windows Apps for S. aureus and M. tuberculosis:
   • MykrobePredictor.S.aureus_v0.1.3.exe
   • MykrobePredictor.M.tuberculosis_v0.1.3.exe
2. Mac OS X Apps for S. aureus and M. tuberculosis
   • MykrobePredictor.S.aureus_v0.1.3.dmg
   • MykrobePredictor.M.tuberculosis_v0.1.3.dmg
3. Please see previous releases for demonstration data.
   • demo_input_file_for_S.aureus_app.fastq.gz (48Mb)
   • demo_input_file_for_M.tuberculosis_app.fastq.gz (72Mb)

Initial public release of Mykrobe predictor for Biorxiv preprint submission

1. 64-bit Windows Apps for S. aureus and M. tuberculosis:
   • MykrobePredictor_S.aureus_v0.1.1_beta.exe
   • MykrobePredictor_M.tuberculosis_v0.1.1_beta.exe
2. Mac OS X Apps for S. aureus and M. tuberculosis
   • MykrobePredictor_S.aureus_v0.1.1_beta.dmg
   • MykrobePredictor_M.tuberculosis_v0.1.1_beta.dmg
3. Demo input files (with real data) for each of S. aureus and M. tuberculosis
   • demo_input_file_for_S.aureus_app.fastq.gz (48Mb)
   • demo_input_file_for_M.tuberculosis_app.fastq.gz (72Mb)

Caveats:
The is a prepublication beta release, and as such there are some cosmetic issues which we will fix in our next release
a) The About button leads to dummy contents
b) The TB app actually says it is version v0.1.2-beta not v0.1.1-beta
The next release will be 0.1.3 for clarity.