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Update and rename mldn-data-flow.md to data-flow.md
adding updated data flow diagram discussed in #8 (comment) renaming page as well since it's part of the mldn repo, we don't need to repeat it.
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@@ -7,10 +7,9 @@ summary: This is a summary of the Marine Life Data Network (MLDN) data flow for | |
mermaid: true | ||
--- | ||
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# MLDN Data Flow | ||
# Marine Life Data Network Data Flow | ||
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```mermaid | ||
%%{ | ||
init: { | ||
'theme': 'base', | ||
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@@ -39,38 +38,33 @@ Access Point | |
C("Darwin Core | ||
Alignment") | ||
D[(NCEI)] | ||
D[("NOAA's National Centers | ||
for Environmental Information (NCEI)")] | ||
E[("OBIS node")] | ||
E[("Ocean Biodiversity | ||
Information System | ||
node")] | ||
G([OBIS]) | ||
G[("Ocean Biodiversity | ||
Information System (OBIS)")] | ||
H([GBIF]) | ||
H[("Global Biodiversity Information Facility (GBIF)")] | ||
I[("IOOS Data Catalog | ||
(data.ioos.us)")] | ||
FC(["Federal Catalogs/ | ||
Products/ | ||
Integration with | ||
Environmental Obs"]) | ||
(data.ioos.us) | ||
(metadata only)")] | ||
A --> B | ||
B -- Metadata --> I | ||
B ----> I | ||
B --> C | ||
B --> D | ||
B ----> D | ||
C --> E | ||
E --> G | ||
E --> H | ||
I --> FC | ||
G --> FC | ||
H --> FC | ||
D --> FC | ||
E -- OBIS-USA --> D | ||
``` | ||
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@@ -178,10 +172,10 @@ aligning datasets to Darwin Core. | |
## Sending to OBIS-USA | ||
Below are the various options for sending your data to OBIS-USA. | ||
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* **Recommended**: use the [Dataset Review Request](https://github.com/ioos/bio_data_guide/issues/new/choose) issue to initialize the request. | ||
* Attend the monthly [Standardizing Marine Biological Data Working Group](https://github.com/ioos/bio_data_guide#monthly-meetings) meeting and discuss transfer options. | ||
* Contribute your dataset (and code) to the `datasets/` directory in the ioos/bio_data_guide repository ([here](https://github.com/ioos/bio_data_guide/tree/main/datasets)). See the [Contribute example applications](https://github.com/ioos/bio_data_guide/blob/main/CONTRIBUTING.md#contribute-example-applications) documentation for more information. | ||
* Contribute your dataset (and code) to the `datasets/` directory in the [ioos/bio_data_guide](https://github.com/ioos/bio_data_guide/) repository. See the [Contribute example applications](https://github.com/ioos/bio_data_guide/blob/main/CONTRIBUTING.md#contribute-example-applications) documentation for more information. | ||
* Email Darwin Core aligned files to OBIS-USA: <[email protected]>. | ||
* Or, use the [Dataset Review Request](https://github.com/ioos/bio_data_guide/issues/new/choose) issue to initialize the request. | ||
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## Sending to NCEI | ||
When planning on submitting data to NCEI, the data provider should coordinate submissions through the IOOS Office to | ||
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@@ -201,7 +195,7 @@ has some affiliation with IOOS). Below is a short summary of the two submission | |
Collections (ATRAC) to submit repeating or multiple delivery data, or data that exceeds 20 GB. | ||
* [S2N](https://www.ncei.noaa.gov/archive/send2ncei/) - Use Send2NCEI to submit non-repeating or single delivery data less than 20 GB. | ||
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**Note:** NCEI and OBIS-USA have established an automated process to archive the datasets from the OBIS-USA IPT. The process archives | ||
{% include note.html content="NCEI and OBIS-USA have established an automated process to archive the datasets from the OBIS-USA IPT. The process archives | ||
the Darwin Core Archive version of the dataset and updates the NCEI Archival Information Package found at | ||
<https://www.ncei.noaa.gov/access/metadata/landing-page/bin/iso?id=gov.noaa.nodc:0250940>. While the OBIS-IPT is an extremely valuable | ||
product, the raw data should be archived at NCEI as well. | ||
product, the raw data should be archived at NCEI as well." %} |