Skip to content

A python packaged version of RFMix (version 1)

License

Notifications You must be signed in to change notification settings

indraniel/rfmix

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

15 Commits
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 

Repository files navigation

RFMix (v1.5.4)

This is a pip-installable version of RFMix, Local Ancestry and Admixture Inference, version 1. You also might be interested in RFMix v2 instead.

Installation

RFMix assumes that you have the openmp support enabled on your C++ compiler.

MacOS

On Mac OS, you'll need g++, which can be installed via homebrew as:

brew install gcc

Afterwards, you can do:

CXX=/usr/local/bin/g++-9 pip install --no-cache-dir git+https://github.com/indraniel/rfmix.git

Linux

Debian/Ubuntu based distributions

sudo apt-get install libomp-dev
pip install --no-cache-dir git+https://github.com/indraniel/rfmix.git

About

A python packaged version of RFMix (version 1)

Resources

License

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published