2024_11

alternative MRD calculation: fixed AF calculation and made it more robust

2024_07

Added new tool to calculate an alternative MRD (calculateMRD.py)

2024_02

Bugfix in barcode_correction.py:

reads with the same UMIs but on the forward and reverse strand are now combined to the same cluster and are all used to generate a common consensus sequence.

2023_11

Added support for Dragen vcfs in select_monitoring_variants.py

Re-release for publication

Re-release to get DOI

2023_06

Modified barcode correction to be less strict for reads with high duplication rates

Re-release for publication

Minor Bugfix

Minor bugfix:

• Allow reading UTF-16 formated input files for annotation

2023_03

added parsing of environment variables for python/samtools/R binaries