test carbma remove and action

hl7-eu · Oct 5, 2023 · 63046ae · 63046ae
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diff --git a/.github/workflows/publisher.yml b/.github/workflows/publisher.yml
@@ -70,4 +70,12 @@ jobs:
       - name: Run the FHIR validator
         uses: docker://hl7fhir/ig-publisher-base:latest
         with:
-          args: java -jar validator_cli.jar ./fsh-generated/resources -version 5.0.0 -output data-validation-compact.html -output-style compact -level errors -allow-example-urls true -level errors -ig hl7.fhir.uv.emedicinal-product-info
+          args: java -jar validator_cli.jar ./fsh-generated/resources -version 5.0.0 -output data-validation-compact.html -output-style compact -level errors -allow-example-urls true -level errors -ig hl7.fhir.uv.emedicinal-product-info
+
+
+      - name: Archive production artifacts
+        uses: actions/upload-artifact@v3
+        with:
+          name: validation-report
+          path: data-validation-compact.html
+          retention-days: 5
diff --git a/.github/workflows/unit-test.yml b/.github/workflows/unit-test.yml
@@ -18,6 +18,8 @@ jobs:
       - name: Install dependencies  
         run: |  
           python -m pip install --upgrade pip  
+          python -m pip install pytest
+          python -m pip install requests
           if [ -f requirements.txt ]; then pip install -r requirements.txt; fi  
    #   - name: Lint with Ruff  
    #     run: |  

diff --git a/input/fsh/examples/carbamazepine-spl-transformed.fsh b/input/fsh/examples/carbamazepine-spl-transformed.fsh
@@ -1,4 +1,4 @@
-Alias: $ = https://spor.ema.europa.eu/rmswi/
+/*Alias: $ = https://spor.ema.europa.eu/rmswi/
 Alias: $epicategory-cs = http://hl7.eu/fhir/ig/gravitate-health/CodeSystem/epicategory-cs
 Alias: $list-empty-reason = http://terminology.hl7.org/CodeSystem/list-empty-reason
 Alias: $codesystem-organizationTypes = http://hl7.org/fhir/us/spl/CodeSystem/codesystem-organizationTypes

diff --git a/input/pagecontent/09-epi-processing.md b/input/pagecontent/09-epi-processing.md
@@ -10,17 +10,24 @@ The definition of the several steps in the processing pipeline:
 <br clear="all"/>
 
 
-The focusing mechanism is complex and can be understood as a multi-step process:
+The focusing mechanism is complex and can be understood as a multistep process:
 1. first the lenses are attached - x(ePI)
 2. the persona vector and IPS and consulted/consumed - x'(ePI)
 3. the necessary data elements are attached (CSS classes to certain DIVs) - f(ePI)
 
-This will created a focused ePI that can be used to show personalized information to the user.
+This will create a focused ePI that can be used to show personalized information to the user.
 
 Diagram:
 <div>{% include e2e-focusing.svg %}</div>
 <br clear="all"/>
 
+## Current developments
+
+The current definition for the FOSPS is here:
+
+https://fosps.gravitatehealth.eu/swagger-fosps/?urls.primaryName=Focusing%20Manager#/Lenses/post_focusing_focus__epiId
+
+Example requests in the github.
 
 ## Example lenses
 
@@ -35,3 +42,5 @@ FOR ALL \<hiperglucemia\> IF patient’s IPS contains \<diabetes\>  THEN add Hig
 2. FOR ALL \<oral intake\> IF patient.literacy is not high THEN add hover overlay with oral intake advice
 3. FOR ALL \<injectable\> IF patient.literacy is low THEN add icon 
 4. FOR ALL \<oral intake\> IF patient.literacy is low THEN add icon
+
+
diff --git a/tests.http b/tests.http
@@ -0,0 +1,26 @@
+## testing focusing lens pregancy MVP2
+
+POST http://fosps.gravitatehealth.eu/focusing/focus/bundlepackageleaflet-2d49ae46735143c1323423b7aea24165?preprocessors=preprocessing-service-manual&lenses=lens-selector-mvp2_pregnancy&patientIdentifier=alicia-1
+
+
+## testing focusing lens pregancy DIV
+
+POST http://fosps.gravitatehealth.eu/focusing/focus/preprocessors=preprocessing-service-manual&lenses=lens-selector-mvp2_pregnancy&patientIdentifier=alicia-1
+
+## List all available preprocessors
+
+GET https://fosps.gravitatehealth.eu/focusing/preprocessing
+
+## List All available lenses
+
+GET https://fosps.gravitatehealth.eu/focusing/lenses
+
+## testing focusing lens pregancy DIV (epi raw)
+
+
+POST http://fosps.gravitatehealth.eu/focusing/focus/bundlepackageleaflet-2d49ae46735143c1323423b7aea24165?preprocessors=preprocessing-service-manual&lenses=lens-selector-div_pregnancy&patientIdentifier=alicia-1
+
+## testing focusing lens pregancy DIV (epi preprocessed)
+
+
+POST http://fosps.gravitatehealth.eu/focusing/focus/processedbundledovato-en?preprocessors=preprocessing-service-manual&lenses=lens-selector-div_pregnancy&patientIdentifier=alicia-1