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Update README.md
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Swap Elizabeth in for Meeta as teacher
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epartan authored Sep 13, 2024
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|:-----------:|:----------:|:--------:|
| 9:30 - 10:10 | [Workshop Introduction](../lectures/workshop_intro_slides.pdf) | Will |
| 10:00 - 11:30 | [Introduction to Variant Calling](../lectures/Variant_calling_intro.pdf) | Elizabeth |
| 11:30 - 11:50 | [Project Organization](../lessons/01_data_organization.md) | Meeta |
| 11:30 - 11:50 | [Project Organization](../lessons/01_data_organization.md) | Elizabeth |
| 11:50 - 12:00 | Overview of self-learning materials and homework submission | Will |

### Before the next class:
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| Time | Topic | Instructor |
|:-----------:|:----------:|:--------:|
| 9:30 - 10:00 | Self-learning lessons review | All |
| 10:00 - 10:30 | [Alignment File Quality Control](../lessons/05_alignment_QC.md) | Meeta |
| 10:00 - 10:30 | [Alignment File Quality Control](../lessons/05_alignment_QC.md) | Elizabeth |
| 10:30 - 10:40 | Break | |
| 10:40 - 11:15 | [Aggregating QC metrics using MultiQC](../lessons/06_aggregate_multiqc.md) | Meeta |
| 10:40 - 11:15 | [Aggregating QC metrics using MultiQC](../lessons/06_aggregate_multiqc.md) | Elizabeth |
| 11:15 - 12:00 | [Variant Calling](../lessons/07_variant_calling.md) | Will |


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| Time | Topic | Instructor |
|:-----------:|:----------:|:--------:|
| 9:30 - 10:00 | Self-learning lessons review | Meeta |
| 10:00 - 10:30 | [Variant Prioritization with SnpSift](../lessons/10_variant_prioritization.md) | Will |
| 9:30 - 10:00 | Self-learning lessons review | Elizabeth |
| 10:00 - 10:30 | [Variant Prioritization with SnpSift](../lessons/10_variant_prioritization.md) | Elizabeth |
| 10:30 - 11:00 | [Exercise](../lessons/11_SnpSift_exercise.md) ([Key](../lessons/SnpSift_exercise_KEY.md)) | Will |
| 11:00 - 11:30 | [Visualization in IGV](../lessons/12_IGV.md) | Will |
| 11:30 - 12:00 | Q & A (review of Automation) | All |
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| 9:30 - 10:30 | Introduction to cBioPortal | Dr. Tali Mazor |
| 10:30 - 11:30 | cBioPortal Practical | Dr. Tali Mazor |
| 11:30 - 11:45 | [Oncoprint Integration](../lessons/13_oncoprint_creation.md) | Will |
| 11:45 - 12:00 | [Wrap up](../lectures/workshop_wrapup_slides.pdf) | Will |
| 11:45 - 12:00 | [Wrap up](../lectures/workshop_wrapup_slides.pdf) | Elizabeth |

## File Format Reference
* [File Formats](../lessons/file_formats_reference.md)
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