fix typo

docs/_sources/installation.rst.txt

@@ -95,7 +95,7 @@ Keep a record of your credentials - we will configure FireWorks to connect to th
 
     * contact your computing center to review their security policy to allow connections from your MongoDB server (best resolution)
     * host your Mongo database on a machine that you are able to securely connect to, e.g. on the supercomputing network itself (ask a system administrator for help)
-    * use a proxy service to forward connections from the MongoDB --> login node --> compute node (you might try, for example, `this tool <https://github.com/bakks/mongo-proxy`_).
+    * use a proxy service to forward connections from the MongoDB --> login node --> compute node (you might try, for example, `the mongo-proxy tool <https://github.com/bakks/mongo-proxy>`_).
     * set up an ssh tunnel to forward connections from allowed machines (the tunnel must be kept alive at all times you are running workflows)
 
 

docs/atomate.lammps.html

@@ -198,7 +198,7 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 
 <dl class="attribute">
 <dt id="atomate.lammps.drones.LammpsDrone.schema">
-<code class="descname">schema</code><em class="property"> = {'root': {'schema', 'input', 'state', 'last_updated', 'dir_name', 'completed_at', 'output'}}</em><a class="headerlink" href="#atomate.lammps.drones.LammpsDrone.schema" title="Permalink to this definition">¶</a></dt>
+<code class="descname">schema</code><em class="property"> = {'root': {'last_updated', 'state', 'schema', 'dir_name', 'output', 'completed_at', 'input'}}</em><a class="headerlink" href="#atomate.lammps.drones.LammpsDrone.schema" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 </dd></dl>

docs/atomate.vasp.html

@@ -411,7 +411,7 @@ <h2>Submodules<a class="headerlink" href="#submodules" title="Permalink to this
 
 <dl class="attribute">
 <dt id="atomate.vasp.drones.VaspDrone.schema">
-<code class="descname">schema</code><em class="property"> = {'analysis': {'warnings', 'max_force', 'errors', 'delta_volume', 'delta_volume_as_percent'}, 'calcs_reversed': {'nelements', 'run_type', 'formula_anonymous', 'composition_unit_cell', 'input', 'has_vasp_completed', 'formula_reduced_abc', 'composition_reduced', 'task', 'dir_name', 'nsites', 'completed_at', 'vasp_version', 'elements', 'formula_pretty', 'output'}, 'input': {'xc_override', 'potcar_spec', 'structure', 'pseudo_potential', 'is_lasph', 'hubbards', 'is_hubbard'}, 'output': {'vbm', 'structure', 'forces', 'spacegroup', 'energy', 'cbm', 'is_metal', 'stress', 'energy_per_atom', 'is_gap_direct', 'bandgap', 'density'}, 'root': {'schema', 'chemsys', 'nelements', 'formula_anonymous', 'composition_unit_cell', 'input', 'state', 'composition_reduced', 'formula_reduced_abc', 'calcs_reversed', 'analysis', 'run_stats', 'dir_name', 'nsites', 'completed_at', 'elements', 'formula_pretty', 'output'}}</em><a class="headerlink" href="#atomate.vasp.drones.VaspDrone.schema" title="Permalink to this definition">¶</a></dt>
+<code class="descname">schema</code><em class="property"> = {'analysis': {'delta_volume_as_percent', 'warnings', 'max_force', 'delta_volume', 'errors'}, 'calcs_reversed': {'composition_unit_cell', 'nelements', 'dir_name', 'run_type', 'formula_anonymous', 'output', 'has_vasp_completed', 'task', 'completed_at', 'input', 'formula_reduced_abc', 'vasp_version', 'composition_reduced', 'nsites', 'formula_pretty', 'elements'}, 'input': {'pseudo_potential', 'is_hubbard', 'hubbards', 'is_lasph', 'potcar_spec', 'xc_override', 'structure'}, 'output': {'cbm', 'spacegroup', 'density', 'energy_per_atom', 'is_gap_direct', 'vbm', 'bandgap', 'is_metal', 'stress', 'forces', 'structure', 'energy'}, 'root': {'state', 'chemsys', 'composition_unit_cell', 'schema', 'run_stats', 'dir_name', 'nelements', 'formula_anonymous', 'output', 'analysis', 'completed_at', 'input', 'nsites', 'formula_reduced_abc', 'composition_reduced', 'calcs_reversed', 'formula_pretty', 'elements'}}</em><a class="headerlink" href="#atomate.vasp.drones.VaspDrone.schema" title="Permalink to this definition">¶</a></dt>
 <dd></dd></dl>
 
 <dl class="staticmethod">

docs/installation.html

@@ -114,7 +114,7 @@ <h3>MongoDB<a class="headerlink" href="#mongodb" title="Permalink to this headli
 <ul class="last simple">
 <li>contact your computing center to review their security policy to allow connections from your MongoDB server (best resolution)</li>
 <li>host your Mongo database on a machine that you are able to securely connect to, e.g. on the supercomputing network itself (ask a system administrator for help)</li>
-<li>use a proxy service to forward connections from the MongoDB –&gt; login node –&gt; compute node (you might try, for example, <a href="#id8"><span class="problematic" id="id9">`this tool &lt;https://github.com/bakks/mongo-proxy`_</span></a>).</li>
+<li>use a proxy service to forward connections from the MongoDB –&gt; login node –&gt; compute node (you might try, for example, <a class="reference external" href="https://github.com/bakks/mongo-proxy">the mongo-proxy tool</a>).</li>
 <li>set up an ssh tunnel to forward connections from allowed machines (the tunnel must be kept alive at all times you are running workflows)</li>
 </ul>
 </div>

docs_rst/installation.rst

@@ -95,7 +95,7 @@ Keep a record of your credentials - we will configure FireWorks to connect to th
 
     * contact your computing center to review their security policy to allow connections from your MongoDB server (best resolution)
     * host your Mongo database on a machine that you are able to securely connect to, e.g. on the supercomputing network itself (ask a system administrator for help)
-    * use a proxy service to forward connections from the MongoDB --> login node --> compute node (you might try, for example, `this tool <https://github.com/bakks/mongo-proxy`_).
+    * use a proxy service to forward connections from the MongoDB --> login node --> compute node (you might try, for example, `the mongo-proxy tool <https://github.com/bakks/mongo-proxy>`_).
     * set up an ssh tunnel to forward connections from allowed machines (the tunnel must be kept alive at all times you are running workflows)