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Added information about TO-DO.
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josefheidler committed Jan 29, 2024
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2 changes: 1 addition & 1 deletion docs/examples/complete.md
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TO-DO...
{== TO-DO ==}
12 changes: 8 additions & 4 deletions docs/gis/index.md
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Expand Up @@ -30,6 +30,7 @@ remotes::install_github("habitus-eu/hbGIS") # (3)!
Before using the hbGIS package to process spatiotemporal behaviour patterns, two additional files must be prepared: a linkage and configuration files.

### 1. Required files for hbGIS analysis

#### Linkage file

The linkage file is a CSV file that contains three specific columns:
Expand All @@ -40,21 +41,24 @@ The linkage file is a CSV file that contains three specific columns:
| `school_id` | For grouping spatiotemporal information. This means that the school shape (polygon) can be mapped to a group of participants. |
| `class_id` | For sub-grouping. Participants from the same school have separate results (class-based). |

An example of a linkage file can be downloaded [here](#).
An example of a linkage file can be downloaded [here](#). {== TO-DO: Add example file. ==}

#### Configuration file

TODO: Added some text.

| Column | Description |
| -------------------| ------------------------------------------------------------------------------------------------------------------------------------------------- |
| `context` | palmplusr fields tables (TO-DO: List of contexts...) |
| `name` | User specified name of formula |
| `formula` | Formula (see more at [palmsplur](https://thets.github.io/palmsplusr/articles/article-3-building-formulas.html)) |
| `is_where_field` | TO-DO.. |
| `after_conversion` | TO-DO.. |
| `is_where_field` | {== TO-DO ==} |
| `after_conversion` | {== TO-DO ==} |

An example of a configuration file can be downloaded [here](#).
An example of a configuration file can be downloaded [here](#). {== TO-DO: Add example file. ==}

### 2. Analysis

#### Configuration

| Parameter | Description |
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9 changes: 7 additions & 2 deletions docs/gui/index.md
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Expand Up @@ -39,11 +39,16 @@ Upon launching the HabitusGUI application, the user will be prompted to select t

Once the user selects the desired analyses, a help menu appears on the screen. Depending on the selected analysis, the menu recommends suitable packages that are required for the analysis. The user can then modify the packages per the recommendations before proceeding with the analysis.

In the following steps, the user must upload the required files, which may include datasets and [configuration files]() depending on the chosen analysis. Additionally, the user may be required to name the dataset.
In the following steps, the user must upload the required files, which may include datasets and [configuration files]() depending on the chosen analysis. Additionally, the user may be required to name the dataset. {== TO-DO: Add configuration file ==}

{== TO-DO: Pictures, finish information usage section. ==}

## Configuration files

{== TO-DO: Added configuration example files. ==}

Examples of configuration files to download include:

1. GGIR (data in [RAW format](#) or in [counts](#))
2. [hbGPS](#)
3. [hbGIS](#)
3. [hbGIS](#)
5 changes: 5 additions & 0 deletions mkdocs.yml
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Expand Up @@ -92,3 +92,8 @@ markdown_extensions:
- pymdownx.magiclink
- pymdownx.details
- tables
- pymdownx.critic
- pymdownx.caret
- pymdownx.keys
- pymdownx.mark
- pymdownx.tilde

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