Skip to content

Commit

Permalink
Add question to FAQ about what type of variants pVAC-Seq supports
Browse files Browse the repository at this point in the history
  • Loading branch information
susannasiebert committed Sep 5, 2017
1 parent 40b52c9 commit b57992a
Showing 1 changed file with 9 additions and 0 deletions.
9 changes: 9 additions & 0 deletions docs/frequently_asked_questions.rst
Original file line number Diff line number Diff line change
Expand Up @@ -10,6 +10,15 @@ Frequently Asked Questions
.. role:: large
.. role:: large-code

:large:`What type of variants does pVAC-Seq support?`

pVAC-Seq makes predictions for all transcripts of a variant that were annotated
as ``missense_variant``, ``inframe_insertions``, ``inframe_deletion``, or
``frameshift_variant`` by VEP as long as the transcript was not also annotated
as ``start_lost``. In addition, pVAC-Seq only includes variants that were
called as homozygous or heterozygous variant. Variants that were not called
are skipped.

:large:`My pVAC-Seq command has been running for a long time. Why is
that?`

Expand Down

0 comments on commit b57992a

Please sign in to comment.