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Minor

Minor #180

Workflow file for this run

name: CI_EXTRA
on: [push, pull_request]
jobs:
test:
name: Tests ${{ matrix.version }} - petsc ${{ matrix.petsc_version }} - ${{ matrix.os }} - ${{ matrix.arch }} - ${{ github.event_name }}
runs-on: ${{ matrix.os }}
env:
JULIA_PETSC_LIBRARY: "/opt/petsc/${{ matrix.petsc_version }}/lib/libpetsc"
strategy:
fail-fast: false
matrix:
version:
- '1.10'
os:
- ubuntu-latest
arch:
- x64
petsc_version:
- '3.15.4'
- '3.22.0'
steps:
- uses: actions/checkout@v4
- name: Cache petsc
id: cache-petsc
uses: actions/cache@v2
with:
path: ${{env.JULIA_PETSC_LIBRARY}}
key: ${{ runner.os }}-build-${{ env.JULIA_PETSC_LIBRARY }}-
restore-keys: |
${{ runner.os }}-build-${{ env.JULIA_PETSC_LIBRARY }}-
${{ runner.os }}-build-
${{ runner.os }}-
- uses: julia-actions/setup-julia@v2
with:
version: ${{ matrix.version }}
arch: ${{ matrix.arch }}
- name: Install petsc dependencies
run: |
sudo apt-get update
sudo apt-get install -y wget gfortran g++ openmpi-bin libopenmpi-dev
- name: Install petsc
##if: steps.cache-petsc.outputs.cache-hit != 'true'
run: |
CURR_DIR=$(pwd)
PACKAGE=petsc
VERSION=${{ matrix.petsc_version }}
INSTALL_ROOT=/opt
PETSC_INSTALL=$INSTALL_ROOT/$PACKAGE/$VERSION
TAR_FILE=$PACKAGE-$VERSION.tar.gz
URL="https://web.cels.anl.gov/projects/petsc/download/release-snapshots/"
ROOT_DIR=/tmp
SOURCES_DIR=$ROOT_DIR/$PACKAGE-$VERSION
BUILD_DIR=$SOURCES_DIR/build
wget -q $URL/$TAR_FILE -O $ROOT_DIR/$TAR_FILE
mkdir -p $SOURCES_DIR
tar xzf $ROOT_DIR/$TAR_FILE -C $SOURCES_DIR --strip-components=1
cd $SOURCES_DIR
./configure --prefix=$PETSC_INSTALL --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 \
--download-mumps --download-scalapack --download-parmetis --download-metis \
--download-ptscotch --with-debugging --with-x=0 --with-shared=1 \
--with-mpi=1 --with-64-bit-indices
make
make install
- name: add MPIPreferences
shell: julia --color=yes --project=. {0}
run: |
using Pkg
Pkg.add("MPIPreferences")
- name: use MPI system binary
shell: julia --color=yes --project=. {0}
run: |
using MPIPreferences
MPIPreferences.use_system_binary()
- run: julia --project=. -e 'using Pkg; Pkg.instantiate(); Pkg.build(); Pkg.precompile()'
- run: julia --project=. --color=yes --check-bounds=yes test/sequential/runtests.jl
- run: julia --project=. --color=yes --check-bounds=yes test/mpi/runtests.jl