Skip to content

Issues: google-deepmind/alphafold3

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

18 Open 80 Closed
18 Open 80 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Question regarding the necessity of downloading database if precalculated MSA
#115 opened Nov 24, 2024 by sky1ove
2
difference between 2.2's multimer and 3.0's A,B chain
#113 opened Nov 24, 2024 by wenhuihuang19791109
sto to json
#112 opened Nov 24, 2024 by wenhuihuang19791109
"ccdCodes" must always be specified as an array?
#111 opened Nov 23, 2024 by smg3d
1
SMILES strings with a \ need to be escaped in input.json file
#110 opened Nov 23, 2024 by smg3d
Why 5 diffusion samples? Possibility to set to 1
#109 opened Nov 23, 2024 by NessimRaou
Run AF3 with precomputed MSAs but search for templates
#108 opened Nov 23, 2024 by ErezTzvi
Wrong chirality of amino acid modifications question Further information is requested
#107 opened Nov 22, 2024 by jaydeb8
With multiple ligand copies (SMILES), sometimes get "Failed to construct RDKit reference structure" bug Something isn't working
#102 opened Nov 21, 2024 by smg3d
1
mmCIF to input JSON documentation Improvements or additions to documentation question Further information is requested
#95 opened Nov 21, 2024 by darkcorvushhh
8
bug: pdb_2022_09_28_mmcif_files.tar replacement with mmcif_files enhancement New feature or request question Further information is requested
#88 opened Nov 20, 2024 by hegelab
8
docker build succeed, but docker run failed setup Problem with installation or setting things up
#83 opened Nov 20, 2024 by carrisonj
7
Residue numbering start specification enhancement New feature or request
#74 opened Nov 19, 2024 by lucajovine
Is there a way to get per-residue embeddings from the model? enhancement New feature or request question Further information is requested
#70 opened Nov 18, 2024 by GUMI-QXP
1
Model does not run correctly on non A100/H100 GPUs bug Something isn't working
#59 opened Nov 15, 2024 by joshabramson
16
rasa calculation failed bug Something isn't working
#55 opened Nov 15, 2024 by vecos1990
1
Question about Post-Translational Modifications (PTMs) in Protein Prediction bug Something isn't working question Further information is requested
#54 opened Nov 15, 2024 by wtni-gidle
3
First issue! Just want to say thank you! good first issue Good for newcomers
#1 opened Nov 11, 2024 by WillHua127
11
ProTip! Add no:assignee to see everything that’s not assigned.