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Yleaf v3.0
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@bramvanwersch bramvanwersch released this 21 Apr 13:39
· 99 commits to master since this release
3.0
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Learn about vigilant mode.

The new 3.0 version of Yleaf is out and ready. These are the most important changes that were made:

  • Haplogroup relation tree is now based on YFull(v10.01) and ISOGG data. Not using the ISOGG marker identifiers anymore as a result.
  • Tree has been updated with new information from both YFull(v10.01) and ISSOG.
  • A haplogroup can now be ancestral, derived or undefined. This depends on the percentage of markers in that state. If more than 60% of markers are in ancestral or derived the haplogroup will the majority group. If the 60% threshold is not met the haplogroup is undefined and will not be taken into account for quality score calculations. This change affects the scores of QC1 and QC3.
  • A script to convert ISOGG marker tables into a format usable by Yleaf. These tables can unfortunately only be used together with the -old flag.
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