Skip to content

Actions: genepi/umi-pipeline-nf

Actions

All workflows

Actions

Loading...
Loading

Showing runs from all workflows
49 workflow runs
49 workflow runs

Filter by Event

Filter by Status

Filter by Branch

Filter by Actor

adapt clustering live input
CI Tests #49: Commit bdcefe8 pushed by AmstlerStephan
December 4, 2024 17:42 23s live_clustering
December 4, 2024 17:42 23s
Adapt processes and naming of processes
CI Tests #48: Commit fb9f862 pushed by AmstlerStephan
December 4, 2024 17:37 22s live_clustering
December 4, 2024 17:37 22s
Adapt input to cluster_live process
CI Tests #47: Commit b462ce2 pushed by AmstlerStephan
December 3, 2024 16:53 28s live_clustering
December 3, 2024 16:53 28s
Implementing first steps with live analysis support
CI Tests #45: Commit f9cfa45 pushed by AmstlerStephan
December 2, 2024 15:57 2m 37s live_clustering
December 2, 2024 15:57 2m 37s
Add fastq plug-in
CI Tests #44: Commit f1a1f76 pushed by AmstlerStephan
December 2, 2024 12:17 2m 19s live_clustering
December 2, 2024 12:17 2m 19s
Add fastq plug-in
CI Tests #43: Commit f1a1f76 pushed by AmstlerStephan
December 2, 2024 12:16 2m 11s dev
dev
December 2, 2024 12:16 2m 11s
print GPU information
CI Tests #42: Commit 4f50808 pushed by AmstlerStephan
September 13, 2024 15:26 3m 35s medaka_GPU
September 13, 2024 15:26 3m 35s
Update usage.md
CI Tests #41: Commit b7472b6 pushed by AmstlerStephan
September 13, 2024 14:40 3m 45s medaka_GPU
September 13, 2024 14:40 3m 45s
Implement GPU support for medaka with docker
CI Tests #40: Commit bb5bf98 pushed by AmstlerStephan
September 13, 2024 14:36 3m 35s medaka_GPU
September 13, 2024 14:36 3m 35s
add filtering before reformating cluster
CI Tests #39: Commit 4226acc pushed by AmstlerStephan
July 31, 2024 11:17 2m 4s stop_after_clustering
July 31, 2024 11:17 2m 4s
Reduce output to only the cluster stats file
CI Tests #38: Commit 8392a21 pushed by AmstlerStephan
July 25, 2024 17:03 1m 58s stop_after_clustering
July 25, 2024 17:03 1m 58s
remove typo
CI Tests #37: Commit 7135f82 pushed by AmstlerStephan
July 25, 2024 13:04 2m 4s stop_after_clustering
July 25, 2024 13:04 2m 4s
adapt publishing
CI Tests #36: Commit 877f052 pushed by AmstlerStephan
July 25, 2024 12:16 2m 4s stop_after_clustering
July 25, 2024 12:16 2m 4s
update id parameter definition
CI Tests #35: Commit 79b8c93 pushed by AmstlerStephan
July 25, 2024 12:06 2m 3s stop_after_clustering
July 25, 2024 12:06 2m 3s
reduce pipeline to clustering
CI Tests #34: Commit ad24d5a pushed by AmstlerStephan
July 25, 2024 12:02 1m 51s stop_after_clustering
July 25, 2024 12:02 1m 51s
remove processes after clustering
CI Tests #32: Commit 105308d pushed by AmstlerStephan
July 25, 2024 11:25 2m 15s stop_after_clustering
July 25, 2024 11:25 2m 15s
update main.nf
CI Tests #31: Commit 94adc31 pushed by AmstlerStephan
July 25, 2024 11:07 2m 11s stop_after_clustering
July 25, 2024 11:07 2m 11s
Starting to implement GPU support for polishing
CI Tests #28: Commit c13cf3f pushed by AmstlerStephan
June 21, 2024 09:42 2m 51s medaka_GPU
June 21, 2024 09:42 2m 51s
Merge pull request #72 from genepi/update_snapshots
CI Tests #27: Commit 7e381b6 pushed by AmstlerStephan
June 20, 2024 14:26 6m 43s medaka_GPU
June 20, 2024 14:26 6m 43s
Merge pull request #72 from genepi/update_snapshots
CI Tests #26: Commit 7e381b6 pushed by AmstlerStephan
June 20, 2024 14:24 6m 25s dev
dev
June 20, 2024 14:24 6m 25s
Update snapshots
CI Tests #25: Pull request #72 opened by AmstlerStephan
June 20, 2024 14:24 6m 30s update_snapshots
June 20, 2024 14:24 6m 30s