Fix mutserve name

genepi · Mar 2, 2024 · 773be26 · 773be26
1 parent 5ae64e8
commit 773be26
Show file tree

Hide file tree

Showing 3 changed files with 3 additions and 3 deletions.
diff --git a/Dockerfile b/Dockerfile
@@ -13,7 +13,7 @@ RUN \
 
 # Install mutserve (not as conda package available)
 
-ENV MUTSERV_VERSION=2.0.0-rc12
+ENV MUTSERVE_VERSION=2.0.0-rc12
 RUN mkdir /opt/mutserve
 WORKDIR "/opt/mutserve"
 #RUN wget https://github.com/seppinho/mutserve/releases/download/v${MUTSERV_VERSION}/mutserve.zip

diff --git a/modules/local/report.nf b/modules/local/report.nf
@@ -26,7 +26,7 @@ process REPORT {
   echo -e "Base Quality\t${params.baseQ}" >> params.txt
   echo -e "Map Quality\t${params.mapQ}" >> params.txt
   echo -e "Alignment Quality\t${params.alignQ}" >> params.txt  
-  echo -e "Mutserv\t\${MUTSERV_VERSION}" >> params.txt 
+  echo -e "Mutserve\t\${MUTSERVE_VERSION}" >> params.txt 
   echo -e "Haplocheck\t\${HAPLOCHECK_VERSION}" >> params.txt 
   echo -e "Haplogrep\t\${HAPLOGREP_VERSION}" >> params.txt 
 

diff --git a/modules/local/sample_report.nf b/modules/local/sample_report.nf
@@ -27,7 +27,7 @@ process SAMPLE_REPORT {
     echo -e "Base Quality\t${params.baseQ}" >> params.txt
     echo -e "Map Quality\t${params.mapQ}" >> params.txt
     echo -e "Alignment Quality\t${params.alignQ}" >> params.txt  
-    echo -e "Mutserv\t\${MUTSERV_VERSION}" >> params.txt 
+    echo -e "Mutserve\t\${MUTSERVE_VERSION}" >> params.txt 
     echo -e "Haplocheck\t\${HAPLOCHECK_VERSION}" >> params.txt 
     echo -e "Haplogrep\t\${HAPLOGREP_VERSION}" >> params.txt