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lukfor committed Sep 18, 2024
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60 changes: 59 additions & 1 deletion docs/index.md
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![](images/logo.png){.right}


# Michigan Imputation Server<br><small>Free Next-Generation Genotype Imputation Platform</small>


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![](images/index.png)

## Latest News

<p>
<small class="text-muted"><i class="far fa-calendar-alt"></i> 21 May 2021</small><br>
We have increased the max sample size to 110k.
</p>

<p>
<small class="text-muted"><i class="far fa-calendar-alt"></i> 15 April 2021</small><br>
Update to new framework completed! Currently, max sample size will be limited to 25k, but we expect to lift this limitation in the next few weeks.
</p>

<p>
<small class="text-muted"><i class="far fa-calendar-alt"></i> 18 March 2020</small><br>
Due to coronavirus-related impacts support may be slower than usual. If you haven't heard back from us after a week or so, feel free to e-mail again to check on the status of things. Take care!
</p>

<p>
<small class="text-muted"><i class="far fa-calendar-alt"></i> 07 November 2019</small><br>
Updated MIS to v1.2.4! Major improvements: Minimac4 for imputation, improved chrX support, QC check right after upload, better documentation. Checkout out our <a href="https://github.com/genepi/imputationserver" target="_blank">GitHub repository</a> for further information.
</p>

<p>
<small class="text-muted"><i class="far fa-calendar-alt"></i> 17 October 2019</small><br>
Michigan Imputation Server at ASHG19. All information is available <a href="https://imputationserver.sph.umich.edu/ashg19/" target="_blank">here</a>.
</p>

<p>
<small class="text-muted"><i class="far fa-calendar-alt"></i> 27 November 2018</small><br>
Redesigned user interface to improve user experience.
</p>

<p>
<small class="text-muted"><i class="far fa-calendar-alt"></i> 27 June 2017</small><br>
Updated pipeline to v1.0.2. Release notes can be found <a href="https://github.com/genepi/imputationserver/releases/tag/1.0.2" target="_blank">here</a>.
</p>

<p>
<small class="text-muted"><i class="far fa-calendar-alt"></i> 29 Aug 2016</small><br>
Imputation server paper is out now: <a href="http://www.nature.com/ng/journal/v48/n10/full/ng.3656.html" target="_blank">Das et al., Nature Genetics 2016</a>
</p>

<p>
<small class="text-muted"><i class="far fa-calendar-alt"></i> 19 April 2016</small><br>
Updated <a target="_blank" href="http://www.haplotype-reference-consortium.org/">HRC Panel (r1.1)</a> available.
</p>

<p>
<small class="text-muted"><i class="far fa-calendar-alt"></i> 12 January 2016</small><br>
New Reference Panel (<a target="_blank" href="./#!pages/caapa">CAAPA</a>) available.
</p>

<p>
<small class="text-muted"><i class="far fa-calendar-alt"></i> 24 April 2015</small><br>
<a target="_blank" href="http://www.haplotype-reference-consortium.org/">HRC release 1</a> (64,976 haplotypes at 39,235,157 SNPs) is now ready for use for HRC consortium members.
</p>
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