Setting up 1ES Pool pipeline #10
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| name: Pingvin Build | |
| on: | |
| push: | |
| branches: [main] | |
| tags: ["v*.*.*"] | |
| pull_request: | |
| branches: [main] | |
| workflow_dispatch: | |
| permissions: | |
| id-token: write | |
| contents: read | |
| env: | |
| CONDA_CACHE_NUMBER: 1 | |
| jobs: | |
| build-and-test: | |
| #runs-on: ["self-hosted", "1ES.Pool=biomedsigproc-github-NC6s_v3"] | |
| runs-on: ["self-hosted", "1ES.Pool=biomedsigproc-gadgetron-NC6s_v3"] | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Setup Miniconda | |
| uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| miniforge-version: latest | |
| # Do not specify environment file - see Cache step below | |
| activate-environment: gadgetron | |
| - name: Get Date | |
| id: get-date | |
| shell: bash | |
| run: echo "YEARMONTH=$(date -u +'%Y%m')" >> $GITHUB_ENV | |
| - name: Cache Conda Env | |
| id: cache-conda | |
| uses: actions/cache@v3 | |
| with: | |
| path: ${{ env.CONDA }}/envs | |
| key: | |
| conda-${{ runner.os }}-${{ runner.arch }}-${{ | |
| hashFiles('environment.yml') }}-${{ | |
| env.YEARMONTH }}-${{ | |
| env.CONDA_CACHE_NUMBER }} | |
| - name: Update Environment | |
| shell: bash -el {0} | |
| run: conda env update -n gadgetron -f environment.yml | |
| if: steps.cache-conda.outputs.cache-hit != 'true' | |
| #- name: Setup tmate session | |
| #uses: mxschmitt/action-tmate@v3 | |
| - name: GPU Check | |
| shell: bash | |
| run: | | |
| sudo apt update | |
| #sudo apt list --installed | grep nvidia | |
| #sudo apt --purge remove -y '*nvidia*' | |
| #sudo apt autoremove -y | |
| #sudo apt install -y ubuntu-drivers-common | |
| ##sudo ubuntu-drivers list --gpgpu | |
| ##sudo ubuntu-drivers install --gpgpu | |
| #sudo ubuntu-drivers install --gpgpu nvidia:535-server | |
| #sudo apt install -y nvidia-utils-535-server | |
| sudo DEBIAN_FRONTEND=noninteractive apt install linux-headers-generic | |
| sudo DEBIAN_FRONTEND=noninteractive apt install nvidia-dkms-535-server | |
| sudo DEBIAN_FRONTEND=noninteractive apt install nvidia-driver-535-server | |
| sudo modprobe nvidia | |
| #which nvidia-smi | |
| nvidia-smi |