removing the schema deparser changes

The `beacon_yaml2md.pl` doc generator contains hard coded definitions to VRS 1.2 `CopyNumber` which doesn't exist in 1.3. This should be fixed separately, possibly w/ revision of the schema documentation method/engine.
ga4gh-beacon · Nov 16, 2024 · b1f81dc · b1f81dc · mrueda · Nov 16, 2024
1 parent c634b81
commit b1f81dc
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Showing 3 changed files with 4 additions and 4 deletions.
diff --git a/bin/beacon_yaml2md.pl b/bin/beacon_yaml2md.pl
@@ -729,9 +729,9 @@ sub add_properties_vrs {
     my ( $property, $data ) = @_;
     my %url = (
         'SequenceExpression' =>
-'https://w3id.org/ga4gh/schema/vrs/1.3/vrs.json#/definitions/',
+'https://w3id.org/ga4gh/schema/vrs/1.2/vrs.json#/definitions/',
         'CopyNumber' =>
-'https://w3id.org/ga4gh/schema/vrs/1.3/vrs.json#/definitions/'
+'https://w3id.org/ga4gh/schema/vrs/1.2/vrs.json#/definitions/'
     );
     if ( exists $url{$property} ) {
         $data->{properties} =

diff --git a/bin/deref_schemas/obj/CopyNumber.yaml b/bin/deref_schemas/obj/CopyNumber.yaml
@@ -1,4 +1,4 @@
 ---
 CopyNumber:
-  properties: '[VRS definition for CopyNumber](https://w3id.org/ga4gh/schema/vrs/1.3/vrs.json#/definitions/CopyNumber)'
+  properties: '[VRS definition for CopyNumber](https://w3id.org/ga4gh/schema/vrs/1.2/vrs.json#/definitions/CopyNumber)'
   type: allOf
diff --git a/docs/schemas-md/obj/CopyNumber.md b/docs/schemas-md/obj/CopyNumber.md
@@ -1,3 +1,3 @@
 |Term | Description | Type | Properties | Example | Enum|
 | ---| ---| ---| ---| ---| --- |
-| CopyNumber | NA | allOf | [VRS definition for CopyNumber](https://w3id.org/ga4gh/schema/vrs/1.3/vrs.json#/definitions/CopyNumber) | NA | NA|
+| CopyNumber | NA | allOf | [VRS definition for CopyNumber](https://w3id.org/ga4gh/schema/vrs/1.2/vrs.json#/definitions/CopyNumber) | NA | NA|