[#85] Initialized a module to manage various line broadening mechanisms

[#85] Create function to calculate Doppler broadening

[#85] Created function to calculate Natural broadening

[#85] Moved Gaussian & Lorentzian shape calculator to dedicated funct… …

…ions that can be shared amongst similar broadening mechanisms

[#85] Created function to calculate simple Instrumental broadening

[#85] various debugging of the individual line shape calcs

[#85] Begun a function that convolutes different broadening mechanism… …

…s together. Not done yet

[#85] created function to convolute line profiles

[#85] documentation on benchmarking the convolution function against … …

…analytic equations

[#85] Created function to calculate a Bi-Maxwellian Doppler broadenin… …

…g as a model for Suprathermal ion

[#85] debugged using Suprathermal ions options

[#85] propagate line_broadening profiles into get_local_spectrum

[#85] init function to calculate pseudo-Voigt shape

[#85] correct mislabeling of FWHM v. variance. No math was wrong it s… …

…eems at least

[#85] added more options for defining which transition an Einstein co… …

…efficient is related to: either central wavelength or adf15 isel

[#85] implemented pseudo-Voigt equation

[#85] added the option to model Instrumental broadening as a sum of G… …

…aussians each with a known variance. NOTE: Assumes no systematic shift as isgit add aurora/line_broaden.py git add aurora/line_broaden.py

[#85] minor debug

[#85] added two methods to get 2-photon line shape

[#85] propogated 2-photon to the mechanism manager

[#85] added zero fill for 2-photon probability at the transition wave… …

…length

[#85] misc debug

[#85] was getting nonsense results from wieghted sum pseudo-Voigt met… …

…hod so included an alternative using scipy's built-in function

[#85] debug Voigt

[#85] debug 2-photon emission

[#85] found a double counting issue in get_local_spectrum in the case… …

… of adf15 files with many types

Fix Pseudo-Voigt profile

odstrcilt authored Feb 29, 2024

[#85] fixed old PEC import code

Merge branch 'Issue085_LineShapes' of github.com:fsciortino/Aurora in… …

…to Issue085_LineShapes

[#85] small debug on 2-photon calc