n - s -> negmod in nmod8/32 dot code (can be avoided, but quick fix f… #914

Workflow file for this run

	name: CI


	on: [push, pull_request]


	jobs:
	##############################################################################
	# ubuntu with gcc
	##############################################################################
	ubuntu-gcc:
	name: Ubuntu GCC, default flags with AVX2, Code Coverage (x10)

	runs-on: ubuntu-latest

	env:
	MAKE: "make -j --output-sync=target"
	CC: "gcc"
	TESTCFLAGS: "-Wall -O1"

	steps:
	- uses: actions/checkout@v3

	- name: "Setup"
	run: \|
	sudo apt install -y libgmp-dev
	sudo apt install -y libmpfr-dev
	sudo apt install -y autoconf
	sudo apt install -y libtool-bin
	gcc --version
	gcov --version
	make --version
	autoconf --version
	libtool --version

	- name: "Configure"
	run: \|
	./bootstrap.sh
	./configure CC=${CC} --enable-avx2 TESTCFLAGS="${TESTCFLAGS}" --disable-static --enable-coverage

	- name: "Compile library"
	run: \|
	$MAKE
	ldd libflint.so

	- name: "Compile tests"
	run: \|
	export FLINT_TEST_MULTIPLIER=10
	$MAKE tests

	- name: "Check"
	run: \|
	export FLINT_TEST_MULTIPLIER=10
	$MAKE check

	- name: "Gather coverage data"
	run: dev/gather_coverage.sh

	- name: "Upload coverage data"
	uses: codecov/[email protected]

	- if: failure()
	name: "If failure, stop all other jobs"
	uses: andymckay/[email protected]



	##############################################################################
	# ubuntu with gcc (assert)
	##############################################################################
	ubuntu-gcc-assert:
	name: Ubuntu GCC (assert, x2)

	runs-on: ubuntu-latest

	env:
	MAKE: "make -j --output-sync=target"
	CC: "gcc"
	CFLAGS: "-Wall -Werror=implicit-function-declaration"

	steps:
	- uses: actions/checkout@v3

	- name: "Setup"
	run: \|
	sudo apt install -y libgmp-dev
	sudo apt install -y libmpfr-dev
	sudo apt install -y autoconf
	sudo apt install -y libtool-bin
	gcc --version
	make --version
	autoconf --version
	libtool --version

	- name: "Configure"
	run: \|
	./bootstrap.sh
	./configure CC=${CC} CFLAGS="${CFLAGS}" --with-gmp=/usr --with-mpfr=/usr --enable-assert --disable-static

	- name: "Compile library"
	run: \|
	$MAKE
	ldd libflint.so

	- name: "Compile tests"
	run: \|
	export FLINT_TEST_MULTIPLIER=2
	$MAKE tests

	- name: "Check"
	run: \|
	export FLINT_TEST_MULTIPLIER=2
	$MAKE check

	- if: failure()
	name: "If failure, stop all other jobs"
	uses: andymckay/[email protected]



	##############################################################################
	# macos with gcc and blas
	##############################################################################
	macos-gcc:
	name: macOS GCC with BLAS (x3)

	runs-on: macos-latest

	env:
	MAKE: "gmake -j -l 10 --output-sync=target"
	CFLAGS: "-Wall"
	EXTRA_OPTIONS: "--disable-static --enable-shared"
	CC: "gcc"

	steps:
	- uses: actions/checkout@v3

	- name: "Setup"
	run: \|
	brew install gcc
	brew install make
	brew install gmp
	brew install mpfr
	brew install autoconf
	brew install libtool
	brew install automake
	brew install openblas
	gcc --version
	gmake --version
	autoconf --version

	- name: "Configure"
	run: \|
	./bootstrap.sh
	./configure CC=${CC} CFLAGS="${CFLAGS}" \
	--with-gmp=$(brew --prefix) \
	--with-mpfr=$(brew --prefix) \
	--with-blas=$(brew --prefix)/opt/openblas \
	${EXTRA_OPTIONS}

	- name: "Compile library"
	run: \|
	$MAKE

	- name: "Compile tests"
	run: \|
	export FLINT_TEST_MULTIPLIER=3
	$MAKE tests

	- name: "Check"
	run: \|
	export FLINT_TEST_MULTIPLIER=3
	$MAKE check

	- if: failure()
	name: "If failure, stop all other jobs"
	uses: andymckay/[email protected]



	##############################################################################
	# freebsd with clang
	##############################################################################
	freebsd-gcc:
	name: FreeBSD Clang (x0.5)

	runs-on: macos-latest

	steps:
	- uses: actions/checkout@v3

	- name: "Run tests on FreeBSD"
	uses: cross-platform-actions/[email protected]
	timeout-minutes: 25
	continue-on-error: true
	with:
	operating_system: freebsd
	version: '13.1'
	shell: bash
	run: \|
	yes \| sudo pkg install pkgconf
	yes \| sudo pkg install gmake
	yes \| sudo pkg install gmp
	yes \| sudo pkg install mpfr
	yes \| sudo pkg install autoconf
	yes \| sudo pkg install libtool
	yes \| sudo pkg install automake
	gmake --version
	clang --version
	autoconf --version
	libtool --version
	touch _is_installed
	export FLINT_TEST_MULTIPLIER=0.5
	./bootstrap.sh
	touch _is_bootstrapped
	./configure CC=clang CFLAGS="-Wall" --disable-static --enable-shared \
	--with-gmp-include=$(pkgconf --variable=includedir gmp) \
	--with-gmp-lib=$(pkgconf --variable=libdir gmp) \
	--with-mpfr-include=$(pkgconf --variable=includedir mpfr) \
	--with-mpfr-lib=$(pkgconf --variable=libdir mpfr)
	touch _is_configured
	gmake -j
	touch _is_built
	gmake -j check
	touch _is_checked

	# Sometimes the FreeBSD runner cannot exit properly. We created files
	# for each step to show that it was able to run the tests.
	- name: "Check that everything was okay"
	run: \|
	if test -e _is_installed;
	then
	if test -e _is_bootstrapped;
	then
	if test -e _is_configured;
	then
	if test -e _is_built;
	then
	if test -e _is_checked;
	then
	echo "All good!"
	else
	echo "Check failed!"
	exit 5
	fi
	else
	echo "Building failed!"
	exit 4
	fi
	else
	echo "Configuration failed!"
	exit 3
	fi
	else
	echo "Bootstrap failed!"
	exit 2
	fi
	else
	echo "Installation failed!"
	exit 1
	fi

	# - if: failure()
	# name: "If failure, stop all other jobs"
	# uses: andymckay/[email protected]



	##############################################################################
	# cygwin with gcc
	##############################################################################
	cygwin-gcc:
	name: Cygwin GCC (x1)

	runs-on: windows-latest

	defaults:
	run:
	shell: C:\cygwin64\bin\bash.exe --login -o igncr '{0}'

	env:
	MAKE: "make -j --output-sync=target"
	REPO: /cygdrive/d/a/flint2/flint2 # FIXME: De-hardcode this
	CFLAGS: "-Wall"
	EXTRA_OPTIONS: "--enable-shared --disable-static"
	CC: "gcc"

	steps:
	- uses: actions/checkout@v3

	- name: "Set up Cygwin"
	uses: gap-actions/setup-cygwin@v1
	with:
	PKGS_TO_INSTALL: "dos2unix,gcc-core,make,libgmp-devel,libmpfr-devel,libtool,autoconf,automake"

	- name: "Setup"
	run: \|
	gcc --version
	make --version
	autoconf --version
	libtool --version

	- name: "Configure"
	run: \|
	cd ${REPO}
	dos2unix configure
	dos2unix bootstrap.sh
	./bootstrap.sh
	./configure CC=${CC} CFLAGS="${CFLAGS}" ${EXTRA_OPTIONS}

	- name: "Compile library"
	run: \|
	cd ${REPO}
	${MAKE}

	- name: "Compile tests"
	run: \|
	cd ${REPO}
	export FLINT_TEST_MULTIPLIER=1
	$MAKE tests

	- name: "Check"
	run: \|
	cd ${REPO}
	export FLINT_TEST_MULTIPLIER=1
	$MAKE check

	- if: failure()
	name: "If failure, stop all other jobs"
	uses: andymckay/[email protected]



	#############################################################################
	# ubuntu with clang
	#############################################################################
	ubuntu-clang:
	name: Ubuntu Clang (x5)

	runs-on: ubuntu-latest

	env:
	MAKE: "make -j --output-sync=target"
	LOCAL: ${{ github.workspace }}/local
	LDFLAGS: "-Wl,-rpath,$LOCAL/lib"
	CFLAGS: "-Wall"
	CC: "clang"
	EXTRA_OPTIONS: "--disable-static --enable-shared"

	steps:
	- uses: actions/checkout@v3

	- name: "Setup"
	run: \|
	sudo apt install -y libgmp-dev
	sudo apt install -y libmpfr-dev
	sudo apt install -y autoconf
	sudo apt install -y libtool-bin
	clang --version
	make --version
	autoconf --version
	libtool --version

	- name: "Configure"
	run: \|
	./bootstrap.sh
	./configure CC=${CC} CFLAGS="${CFLAGS}" ${EXTRA_OPTIONS}

	- name: "Compile library"
	run: \|
	$MAKE
	ldd libflint.so

	- name: "Compile tests"
	run: \|
	export FLINT_TEST_MULTIPLIER=5
	$MAKE tests

	- name: "Check"
	run: \|
	export FLINT_TEST_MULTIPLIER=5
	$MAKE check

	- if: failure()
	name: "If failure, stop all other jobs"
	uses: andymckay/[email protected]



	#############################################################################
	# ubuntu with gcc and cmake (no checks)
	#############################################################################
	ubuntu-cmake-gcc:
	name: Ubuntu GCC via CMake (no check)

	runs-on: ubuntu-latest

	env:
	MAKE: "make -j --output-sync=target"
	LOCAL: ${{ github.workspace }}/local
	LDFLAGS: "-Wl,-rpath,$LOCAL/lib"
	CFLAGS: "-Wall"

	steps:
	- uses: actions/checkout@v3

	- name: "Setup"
	run: \|
	sudo apt install -y cmake
	sudo apt install -y libgmp-dev
	sudo apt install -y libmpfr-dev
	gcc --version
	make --version
	cmake --version

	- name: "Configure"
	run: \|
	mkdir build
	cd build
	cmake -G"Unix Makefiles" -DWITH_NTL=no -DBUILD_TESTING=yes \
	-DCMAKE_BUILD_TYPE=Release -DCMAKE_PREFIX_PATH=${LOCAL} ..

	- name: "Compile library"
	run: \|
	cd build
	$MAKE
	ldd lib/libflint.so

	- if: failure()
	name: "If failure, stop all other jobs"
	uses: andymckay/[email protected]



	#############################################################################
	# mingw with gcc
	#############################################################################
	mingw64-gcc:
	name: MinGW GCC (x0.5)

	runs-on: windows-latest

	defaults:
	run:
	shell: msys2 {0}

	env:
	MAKE: "make -j --output-sync=target"
	CFLAGS: "-Wall"
	EXTRA_OPTIONS: "--enable-shared --disable-static"
	CC: "gcc"

	steps:
	- uses: actions/checkout@v3

	- name: "Setup MinGW"
	uses: msys2/setup-msys2@v2
	with:
	msystem: mingw64
	update: true
	install: mingw-w64-x86_64-gcc mingw-w64-x86_64-autotools

	- name: "Setup"
	run: \|
	gcc --version
	make --version
	autoconf --version
	libtool --version

	- name: "Configure"
	run: \|
	./bootstrap.sh
	./configure CC=${CC} CFLAGS="${CFLAGS}" ${EXTRA_OPTIONS}

	- name: "Compile library"
	run: \|
	${MAKE}

	- name: "Compile tests"
	run: \|
	export FLINT_TEST_MULTIPLIER=0.5
	${MAKE} tests

	- name: "Check"
	run: \|
	export FLINT_TEST_MULTIPLIER=0.5
	${MAKE} check

	- if: failure()
	name: "If failure, stop all other jobs"
	uses: andymckay/[email protected]



	##############################################################################
	# msvc
	##############################################################################
	msvc:
	name: MSVC (x1, excl test)

	runs-on: windows-latest

	steps:
	- uses: actions/checkout@v3

	- name: "Setup Conda"
	uses: conda-incubator/[email protected]
	with:
	miniconda-version: "latest"
	channels: conda-forge

	- name: "Install dependencies"
	run: \|
	conda install --yes -c conda-forge mpfr
	conda install --yes -c conda-forge pthreads-win32
	conda info
	conda list

	- name: "Setup MSVC"
	uses: ilammy/[email protected]
	with:
	arch: x86_64

	- name: "Configure"
	run: \|
	mkdir build
	cd build
	set "LIB=C:\Miniconda3\Library\lib;%LIB%"
	set "CPATH=C:\Miniconda3\Library\include;%CPATH%"
	cmake -G "Ninja" -DCMAKE_C_FLAGS="/wd4018 /wd4146 /wd4244 /wd4267 /wd4305 /wd4996" -DBUILD_TESTING=ON -DCMAKE_BUILD_TYPE=Release ..

	- name: "Build"
	run: \|
	cd build
	cmake --build . -- -j4

	# FIXME: Preferably drop support of CMake and native Windows, or fix so
	# that we can include the test again.
	- name: "Test everything except where MPIR fails"
	run: \|
	cd build
	set "FLINT_TEST_MULTIPLIER=1"
	ctest -j4 --output-on-failure --timeout 180 -E "src-ca_mat-test-t-exp"

	- if: failure()
	name: "If failure, stop all other jobs"
	uses: andymckay/[email protected]



	##############################################################################
	# nemo
	##############################################################################
	nemo:
	name: Nemo.jl

	runs-on: ubuntu-latest

	env:
	MAKE: "make -j --output-sync=target"
	LOCAL: ${{ github.workspace }}/local
	CFLAGS: ""
	EXTRA_OPTIONS: "--disable-static --enable-shared"
	CC: "gcc"

	steps:
	- uses: actions/checkout@v3

	- name: "Setup"
	run: \|
	sudo apt install -y sed
	sudo apt install -y libgmp-dev
	sudo apt install -y libmpfr-dev
	sudo apt install -y autoconf
	sudo apt install -y libtool-bin
	gcc --version
	make --version
	autoconf --version
	libtool --version
	julia --version

	- name: "Configure"
	run: \|
	# Make sure that we output an soname which corresponds to FLINT_JLL's
	# soname
	wget https://raw.githubusercontent.com/JuliaPackaging/Yggdrasil/master/F/FLINT/build_tarballs.jl
	FLINT_JLL_VERSION=$(grep "upstream_version =" build_tarballs.jl \| sed "s/upstream_version = v\"$[0-9\.]*$\"/\1/")
	FLINT_JLL_SONAME=$(grep "$FLINT_JLL_VERSION => " configure.ac \| sed "s/# $FLINT_JLL_VERSION => $[0-9\.]\+$/\1/")
	FLINT_JLL_MAJOR=$(echo $FLINT_JLL_SONAME \| sed "s/$[0-9]\+$\.[0-9]\+\.[0-9]\+/\1/")
	FLINT_JLL_MINOR=$(echo $FLINT_JLL_SONAME \| sed "s/[0-9]\+\.$[0-9]\+$\.[0-9]\+/\1/")
	FLINT_JLL_PATCH=$(echo $FLINT_JLL_SONAME \| sed "s/[0-9]\+\.[0-9]\+\.$[0-9]\+$/\1/")
	sed -i "s/^$FLINT_MAJOR_SO=$[0-9]\+/\1$FLINT_JLL_MAJOR/" configure.ac
	sed -i "s/^$FLINT_MINOR_SO=$[0-9]\+/\1$FLINT_JLL_MINOR/" configure.ac
	sed -i "s/^$FLINT_PATCH_SO=$[0-9]\+/\1$FLINT_JLL_PATCH/" configure.ac

	# Now we can create the makefile
	./bootstrap.sh
	./configure CC=${CC} CFLAGS="${CFLAGS}" --prefix=${LOCAL} ${EXTRA_OPTIONS}

	- name: "Compile and install"
	run: \|
	$MAKE
	$MAKE install

	- name: "Set up Nemo.jl"
	run: \|
	# Override FLINT_jll's libflint with ours
	git clone https://github.com/Nemocas/Nemo.jl.git
	julia -e "import Pkg; Pkg.develop(path=\"./Nemo.jl\");"
	echo -e "[e134572f-a0d5-539d-bddf-3cad8db41a82]\nFLINT = \"${LOCAL}\"" > ~/.julia/artifacts/Overrides.toml
	touch Nemo.jl/src/Nemo.jl
	julia -e "using Nemo; println(\"Path to Nemo's libflint:\", Nemo.libflint)"

	- name: "Check Nemo.jl"
	run: \|
	julia -e "import Pkg; Pkg.test(\"Nemo\")"

	# - if: failure()
	# name: "If failure, stop all other jobs"
	# uses: andymckay/[email protected]

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n - s -> negmod in nmod8/32 dot code (can be avoided, but quick fix f… #914

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n - s -> negmod in nmod8/32 dot code (can be avoided, but quick fix f… #914

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Workflow file for this run