Split extra dependencies and dependency groups (#1238) #2388
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name: Tests | |
on: | |
push: | |
branches: | |
- main | |
pull_request: | |
schedule: | |
- cron: "0 4 * * *" | |
env: | |
FORCE_COLOR: 1 | |
jobs: | |
pytest: | |
name: Unit tests | |
strategy: | |
matrix: | |
os: [ | |
ubuntu-latest, | |
macos-latest, | |
windows-latest, | |
] | |
python: [ | |
'3.9', | |
'3.10', | |
'3.11', | |
'3.12', | |
] | |
fail-fast: false | |
runs-on: ${{ matrix.os }} | |
env: | |
OS: ${{ matrix.os }} | |
steps: | |
- name: Checkout repository | |
uses: actions/checkout@v4 | |
with: | |
fetch-depth: 0 | |
- name: Install the latest version of uv | |
uses: astral-sh/setup-uv@v4 | |
with: | |
enable-cache: true | |
cache-dependency-glob: "pyproject.toml" | |
github-token: ${{ secrets.GITHUB_TOKEN }} | |
- name: Install Python | |
run: uv python install ${{ matrix.python }} | |
- name: Install tox | |
run: uv tool install tox --with tox-uv | |
- name: Add local bin to path on Windows | |
if: runner.os == 'Windows' | |
run: echo "C:/Users/runneradmin/.local/bin" >> $GITHUB_PATH | |
shell: bash | |
- name: Setup test suite | |
run: tox run -v --notest --skip-missing-interpreters false -e ${{ matrix.python }} | |
# Run all tests on schedule, but only non-slow tests on push | |
- name: Run pytest | |
run: | | |
if [ "${{ github.event_name }}" == "schedule" ]; then | |
tox -e pytest | |
else | |
tox -e pytest -- -m "not slow" | |
fi | |
shell: bash # this wouldn't work on Powershell | |
- name: Upload coverage reports to Codecov | |
if: ${{ matrix.os == 'ubuntu-latest' && matrix.python == '3.12' }} | |
uses: codecov/[email protected] | |
env: | |
CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }} | |
cli: | |
name: CLI smoke tests | |
runs-on: ubuntu-latest | |
env: | |
PYTHON_VERSION: '3.12' | |
steps: | |
- name: Checkout repository | |
uses: actions/checkout@v4 | |
with: | |
fetch-depth: 0 | |
- name: Install the latest version of uv | |
uses: astral-sh/setup-uv@v4 | |
with: | |
enable-cache: true | |
cache-dependency-glob: "pyproject.toml" | |
github-token: ${{ secrets.GITHUB_TOKEN }} | |
- name: Install Python | |
run: uv python install ${{ env.PYTHON_VERSION }} | |
- name: Install CLI tools | |
run: uv tool install "torchio@." | |
- name: Test transforms CLI tool | |
run: tiotr --help | |
- name: Test info CLI tool | |
run: tiohd --help |