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create configuration file for MaMMUT training #2045

create configuration file for MaMMUT training

create configuration file for MaMMUT training #2045

Workflow file for this run

name: Lint
on:
pull_request:
env:
PYTHON_VERSION: "3.8"
defaults:
run:
shell: bash -l -eo pipefail {0}
jobs:
lint:
runs-on: ubuntu-latest
steps:
- name: Check out repo
uses: actions/checkout@v3
- name: Setup python
uses: actions/setup-python@v4
with:
python-version: ${{ env.PYTHON_VERSION }}
- name: Update pip
run: python -m pip install --upgrade pip
- name: Install lint utilities
run: |
python -m pip install pre-commit
pre-commit install-hooks
- id: file_changes
uses: trilom/[email protected]
with:
prNumber: ${{ github.event.number }}
output: ' '
- name: Lint modified files
run: pre-commit run --files ${{ steps.file_changes.outputs.files }}
type_checking:
runs-on: ubuntu-latest
steps:
- name: Check out repo
uses: actions/checkout@v3
- name: Setup conda env
uses: conda-incubator/setup-miniconda@v2
with:
auto-update-conda: true
miniconda-version: "latest"
activate-environment: lint
python-version: ${{ env.PYTHON_VERSION }}
- name: Install dependencies
run: |
conda install pytorch torchvision torchaudio cpuonly -c pytorch-nightly
pip install -e ".[dev]"
- name: Type check all files
run: python -m mypy --install-types --non-interactive --config-file mypy.ini