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remove analysis parameters from filename, and moved them into the roo…
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,271 @@ | ||
| #include <iostream> | ||
| #include <sstream> | ||
| #include <vector> | ||
| #include <string> | ||
| #include <iostream> | ||
| #include <fstream> | ||
| #include "TFile.h" | ||
| #include <vector> | ||
| #include <map> | ||
| #include "TStyle.h" | ||
| #include "TCanvas.h" | ||
| #include "TTree.h" | ||
| #include "TH1F.h" | ||
| #include "TH2F.h" | ||
| #include "TH3F.h" | ||
| #include <TObject.h> | ||
| #include <TString.h> | ||
| #include "TBufferJSON.h" | ||
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| #include <chrono> | ||
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| TString fileInName = ""; | ||
| TString fileOutName = ""; | ||
| TString fileNormName = "out"; | ||
| std::string pAction = ""; | ||
| std::string pPlot = ""; | ||
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| bool fileInFound = false; | ||
| bool fileOutFound = false; | ||
| bool fileNormFound = false; | ||
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| bool plotLog = false; | ||
| bool plotPdf = false; | ||
| bool plotJSON = false; | ||
| int pMap = 56; | ||
| int pRebinFactor = 1; | ||
| double pZmin = 0; | ||
| double pZmax = 0; | ||
| double pTimeSignal = 0; | ||
| double pTimeBackground = 0; | ||
| double pXbins = 640; | ||
| double pXmin = 0; | ||
| double pXmax=640; | ||
| double pYbins = 640; | ||
| double pYmin = 0; | ||
| double pYmax=640; | ||
| std::string pXvar = "pos0"; | ||
| std::string pYvar = "pos1"; | ||
| TString cutIn = ""; | ||
| TString cutNorm = ""; | ||
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| int printUsage(std::string errorMessage, char* argv); | ||
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| int main(int argc, char**argv) { | ||
| std::chrono::time_point<std::chrono::system_clock> timeEnd, timeStart; | ||
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| if (argc == 1 || argc % 2 == 0) { | ||
| return printUsage("Wrong number of arguments!", argv[argc - 1]); | ||
| } | ||
| for (int i = 1; i < argc; i += 2) { | ||
| if (strncmp(argv[i], "-fin", 3) == 0) { | ||
| fileInFound = true; | ||
| fileInName = argv[i + 1]; | ||
| } else if (strncmp(argv[i], "-fnorm", 6) == 0) { | ||
| fileNormFound = true; | ||
| fileNormName = argv[i + 1]; | ||
| } else if (strncmp(argv[i], "-fout", 5) == 0) { | ||
| fileOutFound = true; | ||
| fileOutName = argv[i + 1]; | ||
| } else if (strncmp(argv[i], "-ns", 3) == 0) { | ||
| pTimeSignal = atof(argv[i + 1]); | ||
| } else if (strncmp(argv[i], "-nb", 3) == 0) { | ||
| pTimeBackground = atof(argv[i + 1]); | ||
| } else if (strncmp(argv[i], "-act", 4) == 0) { | ||
| pAction = argv[i + 1]; | ||
| } else if (strncmp(argv[i], "-plot", 5) == 0) { | ||
| pPlot = argv[i + 1]; | ||
| if (pPlot.find("j") != std::string::npos) { | ||
| plotJSON = true; | ||
| } | ||
| if (pPlot.find("l") != std::string::npos) { | ||
| plotLog = true; | ||
| } | ||
| if (pPlot.find("p") != std::string::npos) { | ||
| plotPdf = true; | ||
| } | ||
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| } else if (strncmp(argv[i], "-map", 4) == 0) { | ||
| pMap = atoi(argv[i + 1]); | ||
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| } | ||
| else if (strncmp(argv[i], "-xbin", 5) == 0) { | ||
| pXbins = atof(argv[i + 1]); | ||
| } | ||
| else if (strncmp(argv[i], "-xmin", 5) == 0) { | ||
| pXmin = atof(argv[i + 1]); | ||
| } | ||
| else if (strncmp(argv[i], "-xmax", 5) == 0) { | ||
| pXmax = atof(argv[i + 1]); | ||
| } | ||
| else if (strncmp(argv[i], "-ybin", 5) == 0) { | ||
| pYbins = atof(argv[i + 1]); | ||
| } | ||
| else if (strncmp(argv[i], "-ymin", 5) == 0) { | ||
| pYmin = atof(argv[i + 1]); | ||
| } | ||
| else if (strncmp(argv[i], "-ymax", 5) == 0) { | ||
| pYmax = atof(argv[i + 1]); | ||
| } | ||
| else if (strncmp(argv[i], "-zmin", 5) == 0) { | ||
| pZmin = atof(argv[i + 1]); | ||
| } | ||
| else if (strncmp(argv[i], "-zmax", 5) == 0) { | ||
| pZmax = atof(argv[i + 1]); | ||
| } | ||
| else if (strncmp(argv[i], "-xvar", 5) == 0) { | ||
| pXvar = argv[i + 1]; | ||
| } | ||
| else if (strncmp(argv[i], "-yvar", 5) == 0) { | ||
| pYvar = argv[i + 1]; | ||
| } | ||
| else if (strncmp(argv[i], "-cuti", 5) == 0) { | ||
| cutIn = argv[i + 1]; | ||
| } | ||
| else if (strncmp(argv[i], "-cutn", 5) == 0) { | ||
| cutNorm = argv[i + 1]; | ||
| } | ||
| else { | ||
| return printUsage("Wrong type of argument!", argv[i]); | ||
| } | ||
| } | ||
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| if (!fileInFound || !fileInName.EndsWith(".root")) { | ||
| return printUsage("Data file has to be loaded with -fin in.root!", nullptr); | ||
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| } | ||
| if (!fileNormFound || !fileNormName.EndsWith(".root")) { | ||
| return printUsage("Data file has to be loaded with -fnorm norm.root!", nullptr); | ||
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| } | ||
| if (fileOutName.EndsWith(".root")) { | ||
| fileOutName.ReplaceAll(".root", ""); | ||
| } | ||
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| timeStart = std::chrono::system_clock::now(); | ||
| TFile *fIn = new TFile(fileInName, "read"); | ||
| TH2D *hIn = new TH2D("hIn", "hIn",pXbins,pXmin,pXmax,pYbins, pYmin,pYmax); | ||
| TTree *tIn = (TTree*)fIn->Get("clusters_detector"); | ||
| TString drawChoice = pYvar + ":" + pXvar + ">>hIn"; | ||
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| tIn->Draw(drawChoice, cutIn); | ||
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| TFile *fNorm = new TFile(fileNormName, "read"); | ||
| TH2D *hNorm = new TH2D("hNorm", "hNorm",pXbins,pXmin,pXmax,pYbins, pYmin,pYmax); | ||
| TTree *tNorm = (TTree*)fNorm->Get("clusters_detector"); | ||
| drawChoice = pYvar + ":" + pXvar + ">>hNorm"; | ||
| tNorm->Draw(drawChoice, cutNorm); | ||
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| TFile *fOut = new TFile(fileOutName+".root", "recreate"); | ||
| std::cout << fileOutName+".root" << " opened .." << std::endl; | ||
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| TH2D *hOut = new TH2D("hOut", "hOut",pXbins,pXmin,pXmax,pYbins, pYmin,pYmax); | ||
| for (Int_t x = 0; x < pXbins; x++) { | ||
| for (Int_t y = 0; y < pYbins; y++) { | ||
| if (pTimeSignal * pTimeBackground > 0) { | ||
| double valSignal = pTimeBackground * hIn->GetBinContent(x + 1, y + 1); | ||
| double valBackground = pTimeSignal * hNorm->GetBinContent(x + 1, y + 1); | ||
| if (pAction == "n") { | ||
| double val = 0.0; | ||
| if (valBackground > 0) { | ||
| val = valSignal / valBackground; | ||
| } | ||
| hOut->SetBinContent(x + 1, y + 1, val); | ||
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| } else { | ||
| double val = 0.0; | ||
| if (valSignal - valBackground > 0) { | ||
| val = valSignal - valBackground; | ||
| } | ||
| hOut->SetBinContent(x + 1, y + 1, val); | ||
| } | ||
| } | ||
| else { | ||
| double val = hIn->GetBinContent(x + 1, y + 1); | ||
| hOut->SetBinContent(x + 1, y + 1, val); | ||
| } | ||
| } | ||
| } | ||
| gStyle->SetPalette(pMap); | ||
| gStyle->SetPadRightMargin(0.13); | ||
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| TCanvas *c1 = new TCanvas("c1", "c1", 630, 600); | ||
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| c1->SetFillColor(0); | ||
| c1->SetBorderMode(0); | ||
| c1->SetBorderSize(2); | ||
| c1->SetFrameBorderMode(0); | ||
| hOut->GetXaxis()->SetTitle("x coordinate [mm]"); | ||
| hOut->GetYaxis()->SetTitle("y coordinate [mm]"); | ||
| gPad->SetRightMargin(0.18); | ||
| hOut->GetXaxis()->SetTitleOffset(1.4); | ||
| hOut->GetYaxis()->SetTitleOffset(1.4); | ||
| hOut->GetZaxis()->SetTitleOffset(1.5); | ||
| hOut->GetZaxis()->SetTitle("counts"); | ||
| hOut->GetXaxis()->CenterTitle(); | ||
| hOut->GetYaxis()->CenterTitle(); | ||
| hOut->GetZaxis()->CenterTitle(); | ||
| hOut->SetTitle(""); | ||
| hOut->SetStats(0); | ||
| if(pZmax > 0) { | ||
| hOut->GetZaxis()->SetRangeUser(pZmin, pZmax); | ||
| } | ||
| hOut->GetXaxis()->SetRangeUser(pXmin,pXmax); | ||
| hOut->GetYaxis()->SetRangeUser(pYmin,pYmax); | ||
| hOut->Draw("COLZ"); | ||
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| if (plotJSON) { | ||
| TString jsonOut = TBufferJSON::ToJSON(hOut, 3); | ||
| std::ofstream fJSON; | ||
| fJSON.open(fileOutName+".json", std::ios::out); | ||
| fJSON << jsonOut; | ||
| fJSON.close(); | ||
| std::cout << "JSON" << std::endl; | ||
| } | ||
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| if (plotPdf) { | ||
| TString pdfName = ""; | ||
| if (plotLog) { | ||
| c1->SetLogz(true); | ||
| pdfName = fileOutName+"_log.pdf"; | ||
| } else { | ||
| pdfName = fileOutName+".pdf"; | ||
| } | ||
| c1->SaveAs(pdfName); | ||
| } | ||
| fOut->cd(); | ||
| c1->Write(); | ||
| hOut->Write(); | ||
| fOut->Close(); | ||
| fIn->Close(); | ||
| fNorm->Close(); | ||
|
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| timeEnd = std::chrono::system_clock::now(); | ||
|
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| int elapsed_seconds = std::chrono::duration_cast < std::chrono::milliseconds > (timeEnd - timeStart).count(); | ||
|
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| std::cout << "finished computation in " << elapsed_seconds << " ms\n"; | ||
|
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| return 0; | ||
|
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| } | ||
|
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| int printUsage(std::string errorMessage, char* argv) { | ||
| if(argv != nullptr) { | ||
| std::cout << "\nERROR: " << errorMessage << ": " << argv << std::endl; | ||
| } | ||
| else { | ||
| std::cout << "\nERROR: " << errorMessage << std::endl; | ||
| } | ||
|
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| printf("\nUsages:\n"); | ||
| printf("normalize or substract background:\n\t./normalize -fin Run1.root -fnorm Run2.root -fout Out" | ||
| " -ns 0 -nb 0 -act normalize\n"); | ||
|
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| return -1; | ||
| } | ||
|
|
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