Large Files

This release contains large file binaries necessary for scripts in this repository.

output.csv: information necessary for instantiating contact network in network.py
aligned.fasta.xz: alignment file for all global SARS-CoV2 sequences
aligned.fa: alignment file for all Virginia SARS-CoV2 sequences
delta.fa: VA sequences during delta majority (needed for AlternativeMutationalModel/va_delta/freq.py)
omicron.fa: VA sequences during omicron majority (needed for AlternativeMutationalModel/va_omicron/freq.py)