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6 generate graphs from icosahedral meshes #11

Merged
merged 84 commits into from
Jul 25, 2024
Merged

6 generate graphs from icosahedral meshes #11

merged 84 commits into from
Jul 25, 2024

Commits on Jul 5, 2024

  1. Global Encoder-Processor-Decoder graph (#9) 

    * feat: Initial implementation of global graphs

Co-authored by: Mario Santa Cruz <[email protected]>
Co-authored-by: Helen Theissen <[email protected]>
Co-authored-by: Sara Hahner <[email protected]>
Co-authored-by: Jesper Dramsch <[email protected]>
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    JPXKQX authored Jul 5, 2024
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Commits on Jul 6, 2024

  1. fix: attributes as torch.float32

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  2. new test: attributes must be float32

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  3. fix typo

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    JPXKQX committed Jul 6, 2024
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  4. Homogeneize base builders

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  5. improve test docstrings

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    JPXKQX committed Jul 6, 2024
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  6. homogeneize (name as class attribute)

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Commits on Jul 8, 2024

  1. new input config

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  2. new default

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  3. Merge branch 'develop' into fix/global-version

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  4. feat: Initial implementation of global graphs 

    Co-authored by: Mario Santa Cruz <[email protected]>
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  5. add cli command

    @JPXKQX @theissenhelen
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  6. Ignore .pt files

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  7. run pre-commit

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  8. docstring + log erros

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  9. initial tests

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  10. feat: initial version of AttributeBuilder

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  11. refactor: separate into node edge attribute builders

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  12. feat: edge_length moved to edges/attributes.py

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  13. remove __init__

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  14. bugfix (encoder edge lengths) + refector

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  15. feat: support path and dict for config argument

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  16. fix: error

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  17. refactor: naming

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  18. fix: pre-commit

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  19. feat: builders icosahedral

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  20. feat: Add icosahedral graph generation 

    Co-authored-by: Mario Santa Cruz <[email protected]>
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  21. refactor: remove create_shere

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  22. feat: Icosahedral edge builder

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  23. feat: hexagonal graph generation 

    Co-authored-by: Mario Santa Cruz <[email protected]>
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  24. feat: hexagonal builders

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  25. fix: AOI not implemented yet

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  26. fix: abstractmethod and renaming

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  27. chore: add dependencies

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  28. test: add tests for trimesh

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  29. test: add tests for hex (h3)

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  30. fix: imports

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  31. fix: output type

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  32. refactor: delete unused file

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  33. refactor: renaming and positioning

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  34. feat: ensure src and dst always the same

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  35. fix: imports

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  36. fix: edge_name not supported

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  37. test: add tests for TriIcosahedralEdges

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  38. fix: assert missing for Hexagonal edges

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  39. test: hexagonal edges

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  40. fix: avoid same name

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  41. fix: imports

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  42. fix: conflicts

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  43. Merge branch 'develop' into 6-generate-graphs-from-icosahedral-meshes

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Commits on Jul 9, 2024

  1. update tests

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  2. Merge branch 'develop' into 6-generate-graphs-from-icosahedral-meshes

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  3. Include xhops to hexagonal edges

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  4. Merge pull request #14 from ecmwf/hotfix/config_node_name 

    Hotfix: nodes config name

Co-authored-by: <[email protected]>
Co-authored-by: <[email protected]>
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  5. Merge remote-tracking branch 'origin/develop' into 6-generate-graphs-… 

    …from-icosahedral-meshes
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  6. Merge remote-tracking branch 'origin/develop' into 6-generate-graphs-… 

    …from-icosahedral-meshes
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  7. docs: update docstrings

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Commits on Jul 10, 2024

  1. fix: update attribute name

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Commits on Jul 11, 2024

  1. refactor: rename multiscale nodes

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  2. refactor: rename icosahedral nodes

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Commits on Jul 22, 2024

  1. improve: clarity of function

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  2. improve: function syntax

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  3. refactor: simplify resolution assignment

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  4. refactor: improve variable naming in icosahedral graph generation

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  5. more comments

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  6. refactor: naming

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  7. refactor: separate into functions

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Commits on Jul 23, 2024

  1. refactor: remove unused code

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  2. refactor: remove unused options and rename

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  3. doc: clarify cells and nodes

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  4. fix: add return statements

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  5. homogeneize: tri & hex edges

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  6. naming: xhops to x_hops

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  7. naming: x_hops in docstring

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  8. docstring

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  9. blank lines

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  10. fix: add return statement

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  11. Merge branch '6-generate-graphs-from-icosahedral-meshes' of https://g… 

    …ithub.com/ecmwf/anemoi-graphs into 6-generate-graphs-from-icosahedral-meshes
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Commits on Jul 24, 2024

  1. simplify icoshaedral edges

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  2. feat: select edge builder method based on ico node type

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  3. test: adjust tests to new MultiScaleEdges

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  4. docs: improve docstrings

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  5. fix: remove LAM filtering for icosahedral, leave for next PR

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  6. h3 (v4) not supported

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