fix tests

tests/test_reason.py

@@ -0,0 +1,70 @@
+"""Plugin tests."""
+
+from pathlib import Path
+
+import pytest
+from cmem.cmempy.dp.proxy.graph import delete
+from rdflib import Graph
+from rdflib.compare import to_isomorphic
+
+from cmem_plugin_reason.plugin_reason import ReasonPlugin
+from cmem_plugin_reason.utils import REASONERS
+from tests.utils import TestExecutionContext, needs_cmem
+from tests.utils2 import get_remote_graph, import_graph
+
+from . import __path__
+
+UID = "e02aaed014c94e0c91bf960fed127750"
+REASON_DATA_GRAPH_IRI = f"https://ns.eccenca.com/reasoning/{UID}/data/"
+REASON_ONTOLOGY_GRAPH_IRI_1 = f"https://ns.eccenca.com/reasoning/{UID}/vocab/"
+REASON_ONTOLOGY_GRAPH_IRI_2 = f"https://ns.eccenca.com/reasoning/{UID}/vocab2/"
+REASON_ONTOLOGY_GRAPH_IRI_3 = f"https://ns.eccenca.com/reasoning/{UID}/vocab3/"
+REASON_RESULT_GRAPH_IRI = f"https://ns.eccenca.com/reasoning/{UID}/result/"
+
+
+@pytest.fixture
+def _setup(request: pytest.FixtureRequest) -> None:
+    """Set up Reason test"""
+    import_graph(REASON_DATA_GRAPH_IRI, "dataset_owl.ttl")
+    import_graph(REASON_ONTOLOGY_GRAPH_IRI_1, "test_reason_ontology_1.ttl")
+    import_graph(REASON_ONTOLOGY_GRAPH_IRI_2, "test_reason_ontology_2.ttl")
+    import_graph(REASON_ONTOLOGY_GRAPH_IRI_3, "test_reason_ontology_3.ttl")
+
+    request.addfinalizer(lambda: delete(REASON_DATA_GRAPH_IRI))
+    request.addfinalizer(lambda: delete(REASON_ONTOLOGY_GRAPH_IRI_1))
+    request.addfinalizer(lambda: delete(REASON_ONTOLOGY_GRAPH_IRI_2))
+    request.addfinalizer(lambda: delete(REASON_ONTOLOGY_GRAPH_IRI_3))
+    request.addfinalizer(lambda: delete(REASON_RESULT_GRAPH_IRI))  # noqa: PT021
+
+
+@needs_cmem
+def tests_reason(_setup: None) -> None:
+    """Tests for Reason plugin"""
+
+    def test_reasoner(reasoner: str, err_list: list) -> list:
+        ReasonPlugin(
+            data_graph_iri=REASON_DATA_GRAPH_IRI,
+            ontology_graph_iri=REASON_ONTOLOGY_GRAPH_IRI_1,
+            output_graph_iri=REASON_RESULT_GRAPH_IRI,
+            reasoner=reasoner,
+            sub_class=False,
+            class_assertion=True,
+            property_assertion=True,
+            validate_profile=True,
+            import_ontology=True,
+        ).execute(None, context=TestExecutionContext())
+
+        result = get_remote_graph(REASON_RESULT_GRAPH_IRI)
+        test = Graph().parse(Path(__path__[0]) / f"test_{reasoner}.ttl", format="turtle")
+        if to_isomorphic(result) != to_isomorphic(test):
+            err_list.append(reasoner)
+        return err_list
+
+    errors_list: list[str] = []
+    for reasoner in REASONERS:
+        errors_list = test_reasoner(reasoner, errors_list)
+
+    if errors_list:
+        errors = ""
+        errors += f"Test failed for reasoners {', '.join(errors_list)}."
+        raise AssertionError(errors[:-1])

tests/test_validate.py

@@ -13,7 +13,7 @@
 
 from cmem_plugin_reason.plugin_validate import ValidatePlugin
 from cmem_plugin_reason.utils import REASONERS
-from tests.utils import TestExecutionContext
+from tests.utils import TestExecutionContext, needs_cmem
 from tests.utils2 import get_remote_graph, import_graph
 
 from . import __path__
@@ -54,42 +54,8 @@ def _setup(request: pytest.FixtureRequest) -> None:
     request.addfinalizer(lambda: delete(VALIDATE_ONTOLOGY_GRAPH_IRI_3))  # noqa: PT021
 
 
-# @needs_cmem
-# def tests_validate(_setup: None) -> None:
-#     """Tests for Validate plugin"""
-#     result = ValidatePlugin(
-#         ontology_graph_iri=VALIDATE_ONTOLOGY_GRAPH_IRI_1,
-#         output_graph_iri=VALIDATE_RESULT_GRAPH_IRI,
-#         reasoner="elk",
-#         validate_profile=True,
-#         md_filename=MD_FILENAME,
-#         output_entities=True,
-#         mode="inconsistency",
-#     ).execute(None, context=TestExecutionContext(PROJECT_ID))
-#
-#     md_test = (Path(__path__[0]) / "test_validate.md").read_text()
-#     value_dict = get_value_dict(result)
-#     output_graph = get_remote_graph(VALIDATE_RESULT_GRAPH_IRI)
-#     test = Graph().parse(Path(__path__[0]) / "test_validate_output.ttl", format="turtle")
-#     val_errors = ""
-#
-#     if value_dict["markdown"] != md_test:
-#         val_errors += 'EntityPath "markdown" output error. '
-#     if value_dict["ontology_graph_iri"] != VALIDATE_ONTOLOGY_GRAPH_IRI_1:
-#         val_errors += 'EntityPath "ontology_graph_iri" output error. '
-#     if value_dict["reasoner"] != "elk":
-#         val_errors += 'EntityPath "reasoner" output error. '
-#     if value_dict["valid_profiles"] != "Full,DL,EL,QL,RL":
-#         val_errors += 'EntityPath "valid_profiles" output error. '
-#     if md_test != get_resource(PROJECT_ID, MD_FILENAME).decode():
-#         val_errors += "Markdown file error. "
-#     if to_isomorphic(output_graph) != to_isomorphic(test):
-#         val_errors += "Output graph error. "
-#     if val_errors:
-#         raise AssertionError("Validate: " + val_errors[:-1])
-
-
-def tests_validate(_setup: None) -> None:
+@needs_cmem
+def tests_validate(_setup: None) -> None:  # noqa: C901
     """Tests for Validate plugin"""
 
     def test_validate(reasoner: str, err_list: list) -> list: