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Type: Package | ||
Package: datawizard | ||
Title: Easy Data Wrangling and Statistical Transformations | ||
Version: 0.8.0.12 | ||
Version: 0.8.0.13 | ||
Authors@R: c( | ||
person("Indrajeet", "Patil", , "[email protected]", role = "aut", | ||
comment = c(ORCID = "0000-0003-1995-6531", Twitter = "@patilindrajeets")), | ||
|
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#' @title Find variables by its name, variable or value labels | ||
#' @name seek_variables | ||
#' | ||
#' @description This functions seeks variables in a data frame, based on patterns | ||
#' that either match the variable name (column name), variable labels, value labels | ||
#' or factor levels. Matching variable and value labels only works for "labelled" | ||
#' data, i.e. when the variables either have a `label` attribute or `labels` | ||
#' attribute. | ||
#' | ||
#' @param data A data frame. | ||
#' @param pattern Character string (regular expression) to be matched in `data`. | ||
#' May also be a character vector of length > 1. `pattern` is searched for in | ||
#' column names, variable label and value labels attributes, or factor levels of | ||
#' variables in `data`. | ||
#' @param source Character vector, indicating where `pattern` is sought. Use one | ||
#' of more of the following options: | ||
#' | ||
#' - `"name"`: searches in column names. | ||
#' - `"labels"`: searches in variable labels. Only applies when a `label` attribute | ||
#' is set for a variable. | ||
#' - `"values"`: searches in value labels or factor levels. Only applies when a | ||
#' `labels` attribute is set for a variable, or if a variable is a factor. | ||
#' - `"all"`: searches in all of the above. | ||
#' @param fuzzy Logical, if `TRUE`, "fuzzy matching" (partial and close distance | ||
#' matching) will be used to find `pattern`. | ||
#' | ||
#' @return A data frame with three columns: the column index, the column name | ||
#' and - if available - the variable label of all matched variables in `data`. | ||
#' | ||
#' @examples | ||
#' # seek variables with "Length" in variable name or labels | ||
#' seek_variables(iris, "Length") | ||
#' | ||
#' # seek variables with "dependency" in names or labels | ||
#' # column "e42dep" has a label-attribute "elder's dependency" | ||
#' data(efc) | ||
#' seek_variables(efc, "dependency") | ||
#' | ||
#' # "female" only appears as value label attribute - default search is in | ||
#' # variable names and labels only, so no match | ||
#' seek_variables(efc, "female") | ||
#' # when we seek in all sources, we find the variable "e16sex" | ||
#' seek_variables(efc, "female", source = "all") | ||
#' | ||
#' # typo, no match | ||
#' seek_variables(iris, "Lenght") | ||
#' # typo, fuzzy match | ||
#' seek_variables(iris, "Lenght", fuzzy = TRUE) | ||
#' @export | ||
seek_variables <- function(data, pattern, source = c("names", "labels"), fuzzy = FALSE) { | ||
# check valid args | ||
if (!is.data.frame(data)) { | ||
insight::format_error("`data` must be a data frame.") | ||
} | ||
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# check valid args | ||
source <- intersect(source, c("names", "labels", "values", "levels", "column_names", "columns", "all")) | ||
if (is.null(source) || !length(source)) { | ||
insight::format_error("`source` must be one of \"names\", \"labels\", \"values\", a combination of these options, or \"all\".") | ||
} | ||
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pos1 <- pos2 <- pos3 <- NULL | ||
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pos <- unlist(lapply(pattern, function(search_pattern) { | ||
# search in variable names? | ||
if (any(source %in% c("names", "columns", "column_names", "all"))) { | ||
pos1 <- which(grepl(search_pattern, colnames(data))) | ||
# find in near distance? | ||
if (fuzzy) { | ||
pos1 <- c(pos1, .fuzzy_grep(x = colnames(data), pattern = search_pattern)) | ||
} | ||
} | ||
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# search in variable labels? | ||
if (any(source %in% c("labels", "all"))) { | ||
labels <- insight::compact_character(unlist(lapply(data, attr, which = "label", exact = TRUE))) | ||
if (!is.null(labels) && length(labels)) { | ||
found <- grepl(search_pattern, labels) | ||
pos2 <- match(names(labels)[found], colnames(data)) | ||
# find in near distanc? | ||
if (fuzzy) { | ||
pos2 <- c(pos2, .fuzzy_grep(x = labels, pattern = search_pattern)) | ||
} | ||
} | ||
} | ||
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# search for pattern in value labels or levels? | ||
if (any(source %in% c("values", "levels", "all"))) { | ||
values <- insight::compact_list(lapply(data, function(i) { | ||
l <- attr(i, "labels", exact = TRUE) | ||
if (is.null(l) && is.factor(i)) { | ||
levels(i) | ||
} else { | ||
names(l) | ||
} | ||
})) | ||
if (!is.null(values) && length(values)) { | ||
found <- vapply(values, function(i) any(grepl(search_pattern, i)), logical(1)) | ||
pos3 <- match(names(found)[found], colnames(data)) | ||
# find in near distance | ||
if (fuzzy) { | ||
pos3 <- which(vapply( | ||
values, | ||
function(i) { | ||
p <- .fuzzy_grep( | ||
x = i, | ||
pattern = search_pattern | ||
) | ||
!insight::is_empty_object(p[1]) | ||
}, | ||
logical(1) | ||
)) | ||
} | ||
} | ||
} | ||
# get unique variable indices | ||
c(pos1, pos2, pos3) | ||
})) | ||
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# clean up | ||
pos <- unique(pos) | ||
# remove -1 | ||
pos <- pos[which(pos != -1)] | ||
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# variable labels of matching variables | ||
labels <- vapply( | ||
colnames(data[pos]), | ||
function(i) { | ||
l <- attr(data[[i]], "label", exact = TRUE) | ||
if (is.null(l)) { | ||
i | ||
} else { | ||
l | ||
} | ||
}, | ||
character(1) | ||
) | ||
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data.frame( | ||
index = pos, | ||
column = colnames(data)[pos], | ||
labels = labels, | ||
stringsAsFactors = FALSE | ||
) | ||
} |
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