Merge pull request #4 from dmitrymyl/module_development

Updated reqs to python 3.7 and fixed ortho2align CLI parsing.
dmitrymyl · Jul 2, 2021 · 097c062 · 097c062
2 parents 940504b + 8e8c337
commit 097c062
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diff --git a/ortho2align/cli_scripts.py b/ortho2align/cli_scripts.py
@@ -9,7 +9,8 @@
                                              formatter_class=argparse.ArgumentDefaultsHelpFormatter,
                                              fromfile_prefix_chars='@')
 ortho2align_subparsers = ortho2align_parser.add_subparsers(title='Subcommands',
-                                                           metavar='SUBCOMMAND')
+                                                           metavar='SUBCOMMAND',
+                                                           required=True)
 
 bg_from_inter_ranges_parser = ortho2align_subparsers.add_parser('bg_from_inter_ranges',
                                                                 help='Generate background set of genomic ranges from intergenic ranges.',

diff --git a/setup.py b/setup.py
@@ -1,5 +1,6 @@
 from setuptools import setup
 
+
 setup(name='ortho2align',
       version='0.9',
       description='Sequence alignment tool based on syntenic protein neighbourhood.',
@@ -13,7 +14,7 @@
                         'scipy',
                         'sortedcontainers',
                         'tqdm'],
-      python_requires='~=3.6',
+      python_requires='>=3.7',
       entry_points={'console_scripts':
                     ['ortho2align=ortho2align.cli_scripts:ortho2align']},
       zip_safe=False)