Remove $$() construct from condor submission scripts #24
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| name: "Test Runner" | |
| on: | |
| push: | |
| paths: | |
| - "woldrnaseq/*" | |
| - "workflows/*" | |
| - "pyproject.toml" | |
| - "setup.cfg" | |
| - ".github/workflows/ci-test.yml" | |
| jobs: | |
| run-tests: | |
| runs-on: "ubuntu-latest" | |
| steps: | |
| - run: echo "This job is now running on ${{ runner.os }}" | |
| - run: echo "The repository is ${{ github.repository }} on branch ${{ github.ref }}" | |
| - run : sudo apt -y install python3-all samtools | |
| - name: "Check out repository" | |
| uses: actions/checkout@v2 | |
| - run: echo "Checkout successful" | |
| - name: Run tests | |
| run: | | |
| python --version | |
| pip install tox | |
| tox | |
| - run: echo "The job status was ${{ job.status }}" |