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dbmi-bgm · Jan 31, 2023 · e2a79f1 · e2a79f1
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diff --git a/LOG.md b/LOG.md
@@ -1,4 +1,8 @@
 ### Version Updates
 
+#### v1.1.0
+* Conversion to YAML standard
+* Added components to prioritize driver mutations
+
 #### v1.0.0
-* Initial release for TNscope pipeline
+* Initial release
diff --git a/README.md b/README.md
@@ -2,12 +2,13 @@
 
 # CGAP Somatic Pipeline - Sentieon
 
-This repository contains components for the CGAP pipeline for somatic single-nucleotide variants (SNVs), small INDELs, and structural variants (SVs) using Sentieon:
+This repository contains components for the CGAP pipeline for Single Nucleotide Variants (SNVs), small insertions/delitions (INDELs), and Structural Variants (SVs) in somatic data using Sentieon:
 
-  * CWL workflows
-  * CGAP Portal Workflows and MetaWorkflows objects
-  * ECR (Docker) source files, which allow for creation of public Docker images (using `docker build`) or private dynamically-generated ECR images (using [*cgap pipeline utils*](https://github.com/dbmi-bgm/cgap-pipeline-utils/) `deploy_pipeline`)
+  * CWL workflow descriptions
+  * CGAP Portal *Workflow* and *MetaWorkflow* objects
+  * CGAP Portal *Software*, *FileFormat*, and *FileReference* objects
+  * ECR (Docker) source files, which allow for creation of public Docker images (using `docker build`) or private dynamically-generated ECR images (using [*cgap pipeline utils*](https://github.com/dbmi-bgm/cgap-pipeline-utils/) `pipeline_deploy`)
 
-The pipeline can process analysis ready ``bam`` files for a tumor/normal comparison and produces a `vcf` file as output.
+The pipeline can process analysis ready `bam` files for a tumor/normal comparison and produces a `vcf` file as output.
 Documentation for all CGAP Pipelines can now be found here:
 https://cgap-pipeline-main.readthedocs.io/en/latest/
diff --git a/portal_objects/metaworkflows/WGS_somatic_sentieon_tnscope.yaml b/portal_objects/metaworkflows/WGS_somatic_sentieon_tnscope.yaml
@@ -97,7 +97,7 @@ workflows:
     ####################################
     config:
       instance_type: c5n.9xlarge
-      ebs_size: 1.5x
+      ebs_size: "1.5x"
       EBS_optimized: True
       spot_instance: True
       run_name: run_somatic_sentieon_tnscope

diff --git a/portal_objects/metaworkflows/WGS_somatic_sentieon_tnscope_tumoronly.yaml b/portal_objects/metaworkflows/WGS_somatic_sentieon_tnscope_tumoronly.yaml
@@ -74,7 +74,7 @@ workflows:
     ####################################
     config:
       instance_type: c5n.9xlarge
-      ebs_size: 1.5x
+      ebs_size: "1.5x"
       EBS_optimized: True
       spot_instance: True
       run_name: run_somatic_sentieon_tnscope_tumoronly