fix parameter file path

cyverseuk · Oct 27, 2016 · 4bf649d · 4bf649d
1 parent cbeccdd
commit 4bf649d
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/scripts/runRenSeq.sh b/scripts/runRenSeq.sh
@@ -122,7 +122,7 @@ done
 
 echo [`date`] inserting parameters and generating params.xml
 python $basedir/insert_params.py $basedir/param_template.xml whiteList `pwd`/$WHITELIST > params.xml
-python $basedir/insert_params.py $basedir/params.xml genomeSize $genomesize > params.xml
+python $basedir/insert_params.py params.xml genomeSize $genomesize > params.xml
 
 echo [`date`] generating input.xml
 rm input.fofn 2>/dev/null