Code

Prov data input output#1989

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mr-c wants to merge 42 commits intomaincommon-workflow-language/cwltool:mainfrom prov_data_input_outputcommon-workflow-language/cwltool:prov_data_input_outputCopy head branch name to clipboard

+617-88

Commits

Commits on Jun 5, 2023

• Init for the no listing workflow

  jjkoehorst

  committed
  e3eabfe

Commits on Jun 12, 2023

• improved test case with checking if the files are there and if they are not there

  jjkoehorst

  committed
  ab0738f

Commits on Jun 15, 2023

• make clean formatting

  jjkoehorst

  committed
  c559952

• Improved naming for the no_listing test and a creation step of 10.000 files for performance testing

  jjkoehorst

  committed
  c62979a

Commits on Jun 16, 2023

• Identifying what it is processing for provenance

  jjkoehorst

  committed
  bc85a1f

• For the provenance a --no-input option to not copy input files into the provenance directory

  jjkoehorst

  committed
  9a6f4ce

• A work in progress to ensure the test works for no-listing and no-input

  jjkoehorst

  committed
  456b26c

Commits on Jun 18, 2023

• Wokring on specifying input/output for provenance

  jjkoehorst

  committed
  b278f58

Commits on Jun 22, 2023

• working on no-input

  jjkoehorst

  committed
  fd14f0d

• move back from data/input data/output to a data folder to see if RO-Crate can cover that part but still keep the no-input option

  jjkoehorst

  committed
  95cff2b

• Likely missed one

  jjkoehorst

  committed
  cdbf106

• Moved back to provenance_constants.DATA with comments for DATAX to know where the change for switchback could be needed

  jjkoehorst

  committed
  4d8ae62

Commits on Mar 14, 2024

• Merge branch 'main' into prov_data_input_output for updates

  

  Changlin

  committed
  29eee5f

• fix merge err

  

  Changlin

  committed
  5fc090b

Commits on Mar 22, 2024

• fix loadListing of dir for prov

  

  Changlin

  committed
  18a9bd6

• misc change of comments

  

  Changlin

  committed
  fc0e331

Commits on Mar 26, 2024

• fix text, remove vscode space files

  

  Changlin

  committed
  627026c

• remove redundant texts

  

  Changlin

  committed
  96d1e20

Commits on Mar 27, 2024

• Merge pull request #1986 from ElderMedic/prov_data_input_output

  Show description for c7963b3
  ElderMedic

  authored
  c7963b3

Commits on Apr 11, 2024

• minor changes of logging

  

  Changlin

  committed
  88b113b

• Merge branch 'main' into prov_data_input_output

  ElderMedic

  authored
  8f52df9

• Merge branch 'prov_data_input_output' of https://github.com/common-workflow-language/cwltool into prov_data_input_output

  Show description for 55f56b1
  

  Changlin

  committed
  55f56b1

Commits on Apr 17, 2024

• Result of make cleanup

  jjkoehorst

  committed
  c979e29

Commits on May 23, 2024

• Merge pull request #2004 from common-workflow-language/main

  Show description for 0f7df3c
  ElderMedic

  authored
  0f7df3c

Commits on Jun 25, 2024

• changed contents in provenance

  

  Changlin

  committed
  97ad0c2

Commits on Jun 27, 2024

• MADE PROVENANCE_CONSTANTS CONSTANT AGAIN, ADDED SOME COMMENTS

  

  Changlin

  committed
  7d6f35a

• Merge pull request #2011 from common-workflow-language/main

  Show description for a9b5941
  ElderMedic

  authored
  a9b5941

• Fix hasher param type for checksum_copy, improve linting: flake8, pydocstyle

  

  Changlin

  committed
  d052895

Commits on Jun 28, 2024

• fix current_source None issue, improve linting

  

  Changlin

  committed
  61024ff

• docstring fix and lint fix

  

  Changlin

  committed
  b3a85c6

• remove load_listing param for used_artefacts

  

  Changlin

  committed
  7b748de

• fix lint

  

  Changlin

  committed
  a47e73c

• fix conformity issue

  

  Changlin

  committed
  2acc4c0

Commits on Jun 29, 2024

• run black for uncompromising python code format

  

  Changlin

  committed
  d6bdc7f

Commits on Jun 30, 2024

• fix no_input

  

  Changlin

  committed
  0a17526

• black format fix

  

  Changlin

  committed
  fe04191

Commits on Jul 1, 2024

• typo fix

  

  Changlin

  committed
  6b06075

Commits on Jul 3, 2024

• fix typing hint in test_provenance.py

  

  Changlin

  committed
  4d41ca4

Commits on Jul 9, 2024

• improve cwlview viz for large workflow

  

  Changlin

  committed
  f1445e0

Commits on Jul 22, 2024

• Update tests/test_provenance.py

  Show description for b3d9e19
  

  ElderMedic

  and

  mr-c

  authored
  b3d9e19

• Merge branch 'main' into prov_data_input_output

  ElderMedic

  authored
  52b256b

Commits on Oct 2, 2024

• Merge pull request #2045 from common-workflow-language/main

  Show description for 743ac15
  ElderMedic

  authored
  743ac15